Information for 12-GCCCCAGGCTGGG (Motif 18)

A C T G A G T C A G T C A G T C T A G C C T G A A C T G A T C G A T G C G C A T A C T G A C T G A T C G
Reverse Opposite:
A T G C A G T C A G T C C G T A A T C G A T G C A G T C G A C T A T C G C T A G C T A G T C A G T G A C
p-value:1e-8
log p-value:-2.021e+01
Information Content per bp:1.762
Number of Target Sequences with motif23.0
Percentage of Target Sequences with motif2.52%
Number of Background Sequences with motif252.4
Percentage of Background Sequences with motif0.53%
Average Position of motif in Targets54.6 +/- 24.4bp
Average Position of motif in Background51.3 +/- 27.8bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TFAP2A/MA0003.3/Jaspar

Match Rank:1
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-GCCCCAGGCTGGG
CGCCTCAGGCA---
 A C G T A C T G A G T C A G T C A G T C T A G C C T G A A C T G A T C G A T G C G C A T A C T G A C T G A T C G
G T A C T A C G A T G C A G T C A G C T T A G C T G C A T C A G A T C G T A G C C G T A A C G T A C G T A C G T

TFAP2B(var.2)/MA0812.1/Jaspar

Match Rank:2
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-GCCCCAGGCTGGG
AGCCTCAGGCA---
 A C G T A C T G A G T C A G T C A G T C T A G C C T G A A C T G A T C G A T G C G C A T A C T G A C T G A T C G
G T C A T A C G A T G C A G T C A G C T T A G C T G C A T C A G T A C G T A G C C G T A A C G T A C G T A C G T

TFAP2C(var.2)/MA0814.1/Jaspar

Match Rank:3
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-GCCCCAGGCTGGG
AGCCTCAGGCA---
 A C G T A C T G A G T C A G T C A G T C T A G C C T G A A C T G A T C G A T G C G C A T A C T G A C T G A T C G
G T C A T A C G A T G C A G T C A G C T T A G C T C G A T C A G A T C G T A G C C G T A A C G T A C G T A C G T

Zfp809(Zf)/ES-Zfp809-ChIP-Seq(GSE70799)/Homer

Match Rank:4
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-GCCCCAGGCTGGG-
GGGGCTYGKCTGGGA
 A C G T A C T G A G T C A G T C A G T C T A G C C T G A A C T G A T C G A T G C G C A T A C T G A C T G A T C G A C G T
C T A G C A T G C A T G T A C G A G T C G C A T A G C T C T A G A C G T A G T C G A C T A C T G A C T G A C T G T C G A

PB0088.1_Tcfap2e_1/Jaspar

Match Rank:5
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---GCCCCAGGCTGGG
NTNGCCTCAGGCNNN-
 A C G T A C G T A C G T A C T G A G T C A G T C A G T C T A G C C T G A A C T G A T C G A T G C G C A T A C T G A C T G A T C G
G C T A C A G T G A C T A T C G A G T C A G T C A G C T T A G C T C G A T C A G A C T G T A G C C G T A C G T A C G A T A C G T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:6
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-GCCCCAGGCTGGG-
GGCCYCCTGCTGDGH
 A C G T A C T G A G T C A G T C A G T C T A G C C T G A A C T G A T C G A T G C G C A T A C T G A C T G A T C G A C G T
C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:7
Score:0.63
Offset:5
Orientation:forward strand
Alignment:GCCCCAGGCTGGG--
-----WDNCTGGGCA
 A C T G A G T C A G T C A G T C T A G C C T G A A C T G A T C G A T G C G C A T A C T G A C T G A T C G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A

PB0101.1_Zic1_1/Jaspar

Match Rank:8
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-GCCCCAGGCTGGG
CACCCCCGGGGGGG
 A C G T A C T G A G T C A G T C A G T C T A G C C T G A A C T G A T C G A T G C G C A T A C T G A C T G A T C G
A T G C G T C A G A T C G T A C G T A C A T G C T A G C A T C G T A C G A C T G A C T G C A T G A C T G A T C G

AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer

Match Rank:9
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---GCCCCAGGCTGGG
WTGSCCTSAGGS----
 A C G T A C G T A C G T A C T G A G T C A G T C A G T C T A G C C T G A A C T G A T C G A T G C G C A T A C T G A C T G A T C G
G C T A G A C T C A T G A T G C A G T C A G T C G A C T T A C G C T G A C T A G A C T G T A G C A C G T A C G T A C G T A C G T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:10
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:GCCCCAGGCTGGG
-CCCCCTGCTGTG
 A C T G A G T C A G T C A G T C T A G C C T G A A C T G A T C G A T G C G C A T A C T G A C T G A T C G
A C G T G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G