Information for 10-CGCGGCCCGACAC (Motif 16)

A G T C A C T G A G T C A C T G A C T G A G T C A G T C G T A C A C T G G T C A A G T C C G T A A G T C
Reverse Opposite:
A C T G A C G T A C T G A C G T A G T C C A T G A C T G A C T G G T A C A G T C A C T G A G T C A C T G
p-value:1e-9
log p-value:-2.115e+01
Information Content per bp:1.936
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.55%
Number of Background Sequences with motif2.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets54.6 +/- 35.2bp
Average Position of motif in Background53.0 +/- 14.2bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0060.1_Smad3_1/Jaspar

Match Rank:1
Score:0.59
Offset:0
Orientation:forward strand
Alignment:CGCGGCCCGACAC----
CAAATCCAGACATCACA
 A G T C A C T G A G T C A C T G A C T G A G T C A G T C G T A C A C T G G T C A A G T C C G T A A G T C A C G T A C G T A C G T A C G T
G T A C C T G A C G T A C G T A C G A T A G T C A G T C T G C A C T A G G T C A G T A C C T G A A C G T A G T C G C T A T A C G G T C A

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:2
Score:0.56
Offset:5
Orientation:reverse strand
Alignment:CGCGGCCCGACAC
-----CCAGACAG
 A G T C A C T G A G T C A C T G A C T G A G T C A G T C G T A C A C T G G T C A A G T C C G T A A G T C
A C G T A C G T A C G T A C G T A C G T A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:3
Score:0.53
Offset:5
Orientation:reverse strand
Alignment:CGCGGCCCGACAC--
-----CCAGACRSVB
 A G T C A C T G A G T C A C T G A C T G A G T C A G T C G T A C A C T G G T C A A G T C C G T A A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C

INSM1/MA0155.1/Jaspar

Match Rank:4
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:CGCGGCCCGACAC
CGCCCCCTGACA-
 A G T C A C T G A G T C A C T G A C T G A G T C A G T C G T A C A C T G G T C A A G T C C G T A A G T C
G A T C C T A G T G A C A G T C A G T C A T G C A G T C C G A T C A T G T C G A G T A C G T C A A C G T

PB0117.1_Eomes_2/Jaspar

Match Rank:5
Score:0.53
Offset:3
Orientation:reverse strand
Alignment:CGCGGCCCGACAC------
---NNGGCGACACCTCNNN
 A G T C A C T G A G T C A C T G A C T G A G T C A G T C G T A C A C T G G T C A A G T C C G T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A T C G T C G A T C A G A T C G T G A C C T A G G C T A A G T C C T G A A T G C A G T C G A C T G A T C A G T C T A C G A G T C

PB0164.1_Smad3_2/Jaspar

Match Rank:6
Score:0.53
Offset:0
Orientation:forward strand
Alignment:CGCGGCCCGACAC----
TACGCCCCGCCACTCTG
 A G T C A C T G A G T C A C T G A C T G A G T C A G T C G T A C A C T G G T C A A G T C C G T A A G T C A C G T A C G T A C G T A C G T
C A G T G T C A G T A C A C T G G A T C A G T C T A G C A T G C T A C G A G T C G T A C G T C A G T A C G A C T A G T C G A C T A C T G

Zfx/MA0146.2/Jaspar

Match Rank:7
Score:0.53
Offset:-5
Orientation:forward strand
Alignment:-----CGCGGCCCGACAC
GGGGCCGAGGCCTG----
 A C G T A C G T A C G T A C G T A C G T A G T C A C T G A G T C A C T G A C T G A G T C A G T C G T A C A C T G G T C A A G T C C G T A A G T C
A T C G A T C G T A C G C T A G A T G C G A T C A C T G T G C A T C A G A T C G A G T C A G T C A G C T T A C G A C G T A C G T A C G T A C G T

SMAD3/MA0795.1/Jaspar

Match Rank:8
Score:0.52
Offset:2
Orientation:forward strand
Alignment:CGCGGCCCGACAC
--CGTCTAGACA-
 A G T C A C T G A G T C A C T G A C T G A G T C A G T C G T A C A C T G G T C A A G T C C G T A A G T C
A C G T A C G T G A T C C T A G C G A T T A G C A G C T T G C A A T C G G T C A G A T C G C T A A C G T

Sp1(Zf)/Promoter/Homer

Match Rank:9
Score:0.51
Offset:2
Orientation:forward strand
Alignment:CGCGGCCCGACAC-
--GGCCCCGCCCCC
 A G T C A C T G A G T C A C T G A C T G A G T C A G T C G T A C A C T G G T C A A G T C C G T A A G T C A C G T
A C G T A C G T T A C G C T A G A T G C G A T C G T A C A G T C C T A G A G T C A G T C A G T C G T A C A G T C

SP2/MA0516.1/Jaspar

Match Rank:10
Score:0.51
Offset:3
Orientation:forward strand
Alignment:CGCGGCCCGACAC-----
---GCCCCGCCCCCTCCC
 A G T C A C T G A G T C A C T G A C T G A G T C A G T C G T A C A C T G G T C A A G T C C G T A A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A T C G A G T C G A T C A T G C A G T C C A T G A G T C A G T C A G T C G A T C G A T C A G C T A T G C A T G C A T G C