Information for 9-GTTAATCATA (Motif 13)

A C T G A C G T A G C T C G T A G T C A A G C T A G T C G T C A A C G T C G T A
Reverse Opposite:
C G A T C G T A A C G T A C T G C T G A A C G T A C G T C T G A C G T A G T A C
p-value:1e-10
log p-value:-2.379e+01
Information Content per bp:1.869
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.66%
Number of Background Sequences with motif3.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets43.5 +/- 21.1bp
Average Position of motif in Background56.3 +/- 33.1bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HNF1A/MA0046.2/Jaspar

Match Rank:1
Score:0.74
Offset:-1
Orientation:reverse strand
Alignment:-GTTAATCATA----
NGTTAATNATTAACN
 A C G T A C T G A C G T A G C T C G T A G T C A A G C T A G T C G T C A A C G T C G T A A C G T A C G T A C G T A C G T
C G T A C A T G A G C T G C A T C T G A G T C A G C A T A T G C C G T A C A G T G A C T C G T A T C G A G A T C G A C T

HNF1b(Homeobox)/PDAC-HNF1B-ChIP-Seq(GSE64557)/Homer

Match Rank:2
Score:0.73
Offset:0
Orientation:forward strand
Alignment:GTTAATCATA--
GTTAATNATTAA
 A C T G A C G T A G C T C G T A G T C A A G C T A G T C G T C A A C G T C G T A A C G T A C G T
C T A G A C G T G C A T T C G A G T C A G C A T A T C G C G T A C A G T A G C T C T G A T G C A

HNF1B/MA0153.2/Jaspar

Match Rank:3
Score:0.73
Offset:0
Orientation:forward strand
Alignment:GTTAATCATA---
GTTAATGATTAAC
 A C T G A C G T A G C T C G T A G T C A A G C T A G T C G T C A A C G T C G T A A C G T A C G T A C G T
C A T G A G C T G C A T C T G A G T C A G C A T T A C G C G T A C A G T G A C T C T G A T C G A G A T C

Hnf1(Homeobox)/Liver-Foxa2-Chip-Seq(GSE25694)/Homer

Match Rank:4
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-GTTAATCATA--
GGTTAAACATTAA
 A C G T A C T G A C G T A G C T C G T A G T C A A G C T A G T C G T C A A C G T C G T A A C G T A C G T
C T A G C T A G G C A T C G A T C T G A G T C A G C T A A T G C C G T A C A G T G A C T C G T A T G C A

OTX2/MA0712.1/Jaspar

Match Rank:5
Score:0.69
Offset:1
Orientation:forward strand
Alignment:GTTAATCATA
-TTAATCCT-
 A C T G A C G T A G C T C G T A G T C A A G C T A G T C G T C A A C G T C G T A
A C G T G A C T G C A T C G T A C G T A C A G T G A T C A G T C A C G T A C G T

BATF::JUN/MA0462.1/Jaspar

Match Rank:6
Score:0.68
Offset:1
Orientation:reverse strand
Alignment:GTTAATCATA--
-TGAGTCATTTC
 A C T G A C G T A G C T C G T A G T C A A G C T A G T C G T C A A C G T C G T A A C G T A C G T
A C G T C G A T A C T G C G T A A T C G A C G T G T A C C G T A C A G T G C A T G A C T G A T C

GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer

Match Rank:7
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:GTTAATCATA
-YTAATCCY-
 A C T G A C G T A G C T C G T A G T C A A G C T A G T C G T C A A C G T C G T A
A C G T G A T C G C A T C G T A C G T A A C G T G A T C G A T C A G T C A C G T

Fra1(bZIP)/BT549-Fra1-ChIP-Seq(GSE46166)/Homer

Match Rank:8
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--GTTAATCATA
NNATGASTCATH
 A C G T A C G T A C T G A C G T A G C T C G T A G T C A A G C T A G T C G T C A A C G T C G T A
A C T G C T A G T C G A C G A T C A T G G C T A A T C G C G A T G T A C G C T A A G C T G T A C

Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer

Match Rank:9
Score:0.66
Offset:0
Orientation:forward strand
Alignment:GTTAATCATA
NYTAATCCYB
 A C T G A C G T A G C T C G T A G T C A A G C T A G T C G T C A A C G T C G T A
A T C G G A C T C G A T C G T A C G T A C A G T G A T C G A T C G A T C A G C T

PB0129.1_Glis2_2/Jaspar

Match Rank:10
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--GTTAATCATA--
TCTTTANTAATANN
 A C G T A C G T A C T G A C G T A G C T C G T A G T C A A G C T A G T C G T C A A C G T C G T A A C G T A C G T
A G C T A G T C C A G T G C A T C G A T C G T A C G A T G A C T G T C A C G T A G A C T T G C A G C A T C G A T