Information for 1-GCCAGCTYATCGCTCC (Motif 1)

A T C G G T A C A G T C C T G A A C T G A G T C C G A T A G T C G T C A A C G T A G T C C T A G A G T C A G C T A G T C A G T C
Reverse Opposite:
A C T G A C T G C T G A A C T G A G T C C T A G C G T A C A G T C T A G C G T A A C T G A G T C G A C T A C T G A C T G A T G C
p-value:1e-18
log p-value:-4.231e+01
Information Content per bp:1.830
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.88%
Number of Background Sequences with motif1.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets46.1 +/- 30.7bp
Average Position of motif in Background36.1 +/- 6.1bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL013.1_MED-1/Jaspar

Match Rank:1
Score:0.59
Offset:11
Orientation:forward strand
Alignment:GCCAGCTYATCGCTCC-
-----------GCTCCG
 A T C G G T A C A G T C C T G A A C T G A G T C C G A T A G T C G T C A A C G T A G T C C T A G A G T C A G C T A G T C A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C G T A G T C A G T C A T C G

Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer

Match Rank:2
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:GCCAGCTYATCGCTCC
-CCAGCTGTTN-----
 A T C G G T A C A G T C C T G A A C T G A G T C C G A T A G T C G T C A A C G T A G T C C T A G A G T C A G C T A G T C A G T C
A C G T T G A C G T A C C T G A A C T G T G A C G C A T C A T G A C G T A C G T G C T A A C G T A C G T A C G T A C G T A C G T

PH0139.1_Pitx3/Jaspar

Match Rank:3
Score:0.50
Offset:0
Orientation:reverse strand
Alignment:GCCAGCTYATCGCTCC
GNNAGCTAATCCCCCN
 A T C G G T A C A G T C C T G A A C T G A G T C C G A T A G T C G T C A A C G T A G T C C T A G A G T C A G C T A G T C A G T C
A T C G T A C G G A T C G T C A T A C G G T A C C G A T C G T A C T G A A C G T A G T C A G T C G A T C A T G C A G T C A G C T

ETS:E-box(ETS,bHLH)/HPC7-Scl-ChIP-Seq(GSE22178)/Homer

Match Rank:4
Score:0.50
Offset:2
Orientation:reverse strand
Alignment:GCCAGCTYATCGCTCC
--CAGCTGTTTCCT--
 A T C G G T A C A G T C C T G A A C T G A G T C C G A T A G T C G T C A A C G T A G T C C T A G A G T C A G C T A G T C A G T C
A C G T A C G T G T A C C G T A C A T G T A G C A G C T A C T G A G C T G C A T A C G T A G T C A G T C A G C T A C G T A C G T

Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer

Match Rank:5
Score:0.50
Offset:1
Orientation:reverse strand
Alignment:GCCAGCTYATCGCTCC
-HCAGCTGDTN-----
 A T C G G T A C A G T C C T G A A C T G A G T C C G A T A G T C G T C A A C G T A G T C C T A G A G T C A G C T A G T C A G T C
A C G T G T C A A G T C C G T A A C T G G T A C G C A T C T A G C G A T A C G T C A G T A C G T A C G T A C G T A C G T A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:6
Score:0.50
Offset:3
Orientation:reverse strand
Alignment:GCCAGCTYATCGCTCC
---NGCTN--------
 A T C G G T A C A G T C C T G A A C T G A G T C C G A T A G T C G T C A A C G T A G T C C T A G A G T C A G C T A G T C A G T C
A C G T A C G T A C G T T A C G A C T G A G T C A C G T A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NFYA/MA0060.2/Jaspar

Match Rank:7
Score:0.49
Offset:-1
Orientation:forward strand
Alignment:-GCCAGCTYATCGCTCC-
AGAGTGCTGATTGGTCCA
 A C G T A T C G G T A C A G T C C T G A A C T G A G T C C G A T A G T C G T C A A C G T A G T C C T A G A G T C A G C T A G T C A G T C A C G T
G C T A C A T G T G C A T A C G G A C T A C T G A G T C A G C T A T C G C T G A A G C T C G A T T C A G T A C G G A C T A G T C T A G C T C G A

MyoG(bHLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer

Match Rank:8
Score:0.49
Offset:2
Orientation:reverse strand
Alignment:GCCAGCTYATCGCTCC
--CAGCTGTT------
 A T C G G T A C A G T C C T G A A C T G A G T C C G A T A G T C G T C A A C G T A G T C C T A G A G T C A G C T A G T C A G T C
A C G T A C G T A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G C T A C G T A C G T A C G T A C G T A C G T A C G T

ZNF669(Zf)/HEK293-ZNF669.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:9
Score:0.48
Offset:0
Orientation:forward strand
Alignment:GCCAGCTYATCGCTCC
GARTGGTCATCGCCC-
 A T C G G T A C A G T C C T G A A C T G A G T C C G A T A G T C G T C A A C G T A G T C C T A G A G T C A G C T A G T C A G T C
T A C G C G T A T C A G G A C T C T A G A C T G C A G T T A G C T C G A A C G T G T A C C T A G A G T C A G T C G A T C A C G T

TFAP4/MA0691.1/Jaspar

Match Rank:10
Score:0.48
Offset:0
Orientation:forward strand
Alignment:GCCAGCTYATCGCTCC
AACAGCTGAT------
 A T C G G T A C A G T C C T G A A C T G A G T C C G A T A G T C G T C A A C G T A G T C C T A G A G T C A G C T A G T C A G T C
T G C A G C T A A G T C G T C A A T C G T A G C G A C T A T C G C G T A A G C T A C G T A C G T A C G T A C G T A C G T A C G T