Rank | Motif | Name | P-value | log P-pvalue | q-value (Benjamini) | # Target Sequences with Motif | % of Targets Sequences with Motif | # Background Sequences with Motif | % of Background Sequences with Motif | Motif File |
SVG |
1 |
| Max(bHLH)/K562-Max-ChIP-Seq(GSE31477)/Homer | 1e-110 | -2.534e+02 | 0.0000 | 228.0 | 28.43% | 2105.9 | 4.61% | motif file (matrix) |
svg |
2 |
| n-Myc(bHLH)/mES-nMyc-ChIP-Seq(GSE11431)/Homer | 1e-109 | -2.519e+02 | 0.0000 | 245.0 | 30.55% | 2514.9 | 5.50% | motif file (matrix) |
svg |
3 |
| c-Myc(bHLH)/mES-cMyc-ChIP-Seq(GSE11431)/Homer | 1e-94 | -2.184e+02 | 0.0000 | 196.0 | 24.44% | 1771.5 | 3.88% | motif file (matrix) |
svg |
4 |
| BMAL1(bHLH)/Liver-Bmal1-ChIP-Seq(GSE39860)/Homer | 1e-88 | -2.049e+02 | 0.0000 | 324.0 | 40.40% | 5603.3 | 12.26% | motif file (matrix) |
svg |
5 |
| CLOCK(bHLH)/Liver-Clock-ChIP-Seq(GSE39860)/Homer | 1e-88 | -2.046e+02 | 0.0000 | 194.0 | 24.19% | 1875.9 | 4.10% | motif file (matrix) |
svg |
6 |
| NPAS(bHLH)/Liver-NPAS-ChIP-Seq(GSE39860)/Homer | 1e-88 | -2.043e+02 | 0.0000 | 305.0 | 38.03% | 4975.7 | 10.89% | motif file (matrix) |
svg |
7 |
| c-Myc(bHLH)/LNCAP-cMyc-ChIP-Seq(Unpublished)/Homer | 1e-76 | -1.771e+02 | 0.0000 | 184.0 | 22.94% | 1969.8 | 4.31% | motif file (matrix) |
svg |
8 |
| USF1(bHLH)/GM12878-Usf1-ChIP-Seq(GSE32465)/Homer | 1e-74 | -1.727e+02 | 0.0000 | 163.0 | 20.32% | 1542.8 | 3.38% | motif file (matrix) |
svg |
9 |
| NPAS2(bHLH)/Liver-NPAS2-ChIP-Seq(GSE39860)/Homer | 1e-73 | -1.703e+02 | 0.0000 | 234.0 | 29.18% | 3413.0 | 7.47% | motif file (matrix) |
svg |
10 |
| CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer | 1e-67 | -1.549e+02 | 0.0000 | 79.0 | 9.85% | 269.9 | 0.59% | motif file (matrix) |
svg |
11 |
| bHLHE40(bHLH)/HepG2-BHLHE40-ChIP-Seq(GSE31477)/Homer | 1e-52 | -1.206e+02 | 0.0000 | 120.0 | 14.96% | 1187.3 | 2.60% | motif file (matrix) |
svg |
12 |
| BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer | 1e-49 | -1.144e+02 | 0.0000 | 84.0 | 10.47% | 547.8 | 1.20% | motif file (matrix) |
svg |
13 |
| Usf2(bHLH)/C2C12-Usf2-ChIP-Seq(GSE36030)/Homer | 1e-46 | -1.074e+02 | 0.0000 | 93.0 | 11.60% | 767.6 | 1.68% | motif file (matrix) |
svg |
14 |
| MITF(bHLH)/MastCells-MITF-ChIP-Seq(GSE48085)/Homer | 1e-28 | -6.478e+01 | 0.0000 | 123.0 | 15.34% | 2229.0 | 4.88% | motif file (matrix) |
svg |
15 |
| HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer | 1e-20 | -4.615e+01 | 0.0000 | 159.0 | 19.83% | 4149.5 | 9.08% | motif file (matrix) |
svg |
16 |
| JunB(bZIP)/DendriticCells-Junb-ChIP-Seq(GSE36099)/Homer | 1e-19 | -4.438e+01 | 0.0000 | 60.0 | 7.48% | 815.8 | 1.78% | motif file (matrix) |
svg |
17 |
| Ptf1a(bHLH)/Panc1-Ptf1a-ChIP-Seq(GSE47459)/Homer | 1e-18 | -4.163e+01 | 0.0000 | 271.0 | 33.79% | 9335.0 | 20.42% | motif file (matrix) |
svg |
18 |
| BATF(bZIP)/Th17-BATF-ChIP-Seq(GSE39756)/Homer | 1e-16 | -3.890e+01 | 0.0000 | 60.0 | 7.48% | 918.1 | 2.01% | motif file (matrix) |
svg |
19 |
| AP-1(bZIP)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer | 1e-16 | -3.772e+01 | 0.0000 | 68.0 | 8.48% | 1179.3 | 2.58% | motif file (matrix) |
svg |
20 |
| Fra1(bZIP)/BT549-Fra1-ChIP-Seq(GSE46166)/Homer | 1e-16 | -3.725e+01 | 0.0000 | 53.0 | 6.61% | 757.3 | 1.66% | motif file (matrix) |
svg |
21 |
| Atf3(bZIP)/GBM-ATF3-ChIP-Seq(GSE33912)/Homer | 1e-14 | -3.291e+01 | 0.0000 | 57.0 | 7.11% | 961.4 | 2.10% | motif file (matrix) |
svg |
22 |
| HEB(bHLH)/mES-Heb-ChIP-Seq(GSE53233)/Homer | 1e-14 | -3.291e+01 | 0.0000 | 207.0 | 25.81% | 6939.4 | 15.18% | motif file (matrix) |
svg |
23 |
| Fra2(bZIP)/Striatum-Fra2-ChIP-Seq(GSE43429)/Homer | 1e-13 | -3.172e+01 | 0.0000 | 47.0 | 5.86% | 699.2 | 1.53% | motif file (matrix) |
svg |
24 |
| Fosl2(bZIP)/3T3L1-Fosl2-ChIP-Seq(GSE56872)/Homer | 1e-13 | -3.123e+01 | 0.0000 | 40.0 | 4.99% | 522.1 | 1.14% | motif file (matrix) |
svg |
25 |
| Gata6(Zf)/HUG1N-GATA6-ChIP-Seq(GSE51936)/Homer | 1e-13 | -3.073e+01 | 0.0000 | 56.0 | 6.98% | 983.9 | 2.15% | motif file (matrix) |
svg |
26 |
| Gata4(Zf)/Heart-Gata4-ChIP-Seq(GSE35151)/Homer | 1e-13 | -3.043e+01 | 0.0000 | 61.0 | 7.61% | 1147.3 | 2.51% | motif file (matrix) |
svg |
27 |
| Jun-AP1(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer | 1e-12 | -2.975e+01 | 0.0000 | 33.0 | 4.11% | 374.4 | 0.82% | motif file (matrix) |
svg |
28 |
| Gata1(Zf)/K562-GATA1-ChIP-Seq(GSE18829)/Homer | 1e-12 | -2.862e+01 | 0.0000 | 45.0 | 5.61% | 706.9 | 1.55% | motif file (matrix) |
svg |
29 |
| Gata2(Zf)/K562-GATA2-ChIP-Seq(GSE18829)/Homer | 1e-12 | -2.787e+01 | 0.0000 | 46.0 | 5.74% | 751.9 | 1.65% | motif file (matrix) |
svg |
30 |
| GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer | 1e-10 | -2.428e+01 | 0.0000 | 72.0 | 8.98% | 1727.3 | 3.78% | motif file (matrix) |
svg |
31 |
| E-box(bHLH)/Promoter/Homer | 1e-9 | -2.265e+01 | 0.0000 | 24.0 | 2.99% | 264.2 | 0.58% | motif file (matrix) |
svg |
32 |
| NF-E2(bZIP)/K562-NFE2-ChIP-Seq(GSE31477)/Homer | 1e-8 | -2.041e+01 | 0.0000 | 12.0 | 1.50% | 60.9 | 0.13% | motif file (matrix) |
svg |
33 |
| TFE3(bHLH)/MEF-TFE3-ChIP-Seq(GSE75757)/Homer | 1e-8 | -1.914e+01 | 0.0000 | 18.0 | 2.24% | 176.0 | 0.39% | motif file (matrix) |
svg |
34 |
| Bach2(bZIP)/OCILy7-Bach2-ChIP-Seq(GSE44420)/Homer | 1e-7 | -1.718e+01 | 0.0000 | 24.0 | 2.99% | 352.8 | 0.77% | motif file (matrix) |
svg |
35 |
| Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer | 1e-6 | -1.417e+01 | 0.0000 | 193.0 | 24.06% | 7898.2 | 17.28% | motif file (matrix) |
svg |
36 |
| Nrf2(bZIP)/Lymphoblast-Nrf2-ChIP-Seq(GSE37589)/Homer | 1e-5 | -1.305e+01 | 0.0000 | 9.0 | 1.12% | 62.5 | 0.14% | motif file (matrix) |
svg |
37 |
| REST-NRSF(Zf)/Jurkat-NRSF-ChIP-Seq/Homer | 1e-5 | -1.191e+01 | 0.0001 | 6.0 | 0.75% | 25.5 | 0.06% | motif file (matrix) |
svg |
38 |
| p63(p53)/Keratinocyte-p63-ChIP-Seq(GSE17611)/Homer | 1e-4 | -1.137e+01 | 0.0001 | 30.0 | 3.74% | 701.1 | 1.53% | motif file (matrix) |
svg |
39 |
| Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer | 1e-4 | -1.095e+01 | 0.0002 | 83.0 | 10.35% | 2939.4 | 6.43% | motif file (matrix) |
svg |
40 |
| Fli1(ETS)/CD8-FLI-ChIP-Seq(GSE20898)/Homer | 1e-4 | -1.071e+01 | 0.0002 | 82.0 | 10.22% | 2914.9 | 6.38% | motif file (matrix) |
svg |
41 |
| MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer | 1e-4 | -9.662e+00 | 0.0006 | 56.0 | 6.98% | 1837.6 | 4.02% | motif file (matrix) |
svg |
42 |
| Bach1(bZIP)/K562-Bach1-ChIP-Seq(GSE31477)/Homer | 1e-4 | -9.632e+00 | 0.0006 | 7.0 | 0.87% | 55.6 | 0.12% | motif file (matrix) |
svg |
43 |
| Elk4(ETS)/Hela-Elk4-ChIP-Seq(GSE31477)/Homer | 1e-4 | -9.319e+00 | 0.0008 | 50.0 | 6.23% | 1602.9 | 3.51% | motif file (matrix) |
svg |
44 |
| Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer | 1e-3 | -8.984e+00 | 0.0010 | 105.0 | 13.09% | 4164.6 | 9.11% | motif file (matrix) |
svg |
45 |
| Elk1(ETS)/Hela-Elk1-ChIP-Seq(GSE31477)/Homer | 1e-3 | -8.538e+00 | 0.0016 | 49.0 | 6.11% | 1613.7 | 3.53% | motif file (matrix) |
svg |
46 |
| EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer | 1e-3 | -8.064e+00 | 0.0025 | 37.0 | 4.61% | 1133.5 | 2.48% | motif file (matrix) |
svg |
47 |
| ETV1(ETS)/GIST48-ETV1-ChIP-Seq(GSE22441)/Homer | 1e-3 | -7.317e+00 | 0.0051 | 83.0 | 10.35% | 3291.8 | 7.20% | motif file (matrix) |
svg |
48 |
| Olig2(bHLH)/Neuron-Olig2-ChIP-Seq(GSE30882)/Homer | 1e-3 | -7.117e+00 | 0.0061 | 109.0 | 13.59% | 4590.4 | 10.04% | motif file (matrix) |
svg |
49 |
| Etv2(ETS)/ES-ER71-ChIP-Seq(GSE59402)/Homer(0.967) | 1e-3 | -7.076e+00 | 0.0063 | 54.0 | 6.73% | 1952.1 | 4.27% | motif file (matrix) |
svg |
50 |
| KLF14(Zf)/HEK293-KLF14.GFP-ChIP-Seq(GSE58341)/Homer | 1e-3 | -7.032e+00 | 0.0064 | 128.0 | 15.96% | 5557.0 | 12.16% | motif file (matrix) |
svg |
51 |
| MafB(bZIP)/BMM-Mafb-ChIP-Seq(GSE75722)/Homer | 1e-3 | -6.912e+00 | 0.0071 | 23.0 | 2.87% | 629.2 | 1.38% | motif file (matrix) |
svg |
52 |
| GABPA(ETS)/Jurkat-GABPa-ChIP-Seq(GSE17954)/Homer | 1e-2 | -6.692e+00 | 0.0087 | 58.0 | 7.23% | 2172.6 | 4.75% | motif file (matrix) |
svg |
53 |
| Chop(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer | 1e-2 | -6.581e+00 | 0.0095 | 13.0 | 1.62% | 274.7 | 0.60% | motif file (matrix) |
svg |
54 |
| ETS1(ETS)/Jurkat-ETS1-ChIP-Seq(GSE17954)/Homer | 1e-2 | -6.350e+00 | 0.0118 | 64.0 | 7.98% | 2489.0 | 5.45% | motif file (matrix) |
svg |
55 |
| Twist(bHLH)/HMLE-TWIST1-ChIP-Seq(Chang_et_al)/Homer | 1e-2 | -6.316e+00 | 0.0120 | 15.0 | 1.87% | 353.6 | 0.77% | motif file (matrix) |
svg |
56 |
| Maz(Zf)/HepG2-Maz-ChIP-Seq(GSE31477)/Homer | 1e-2 | -6.122e+00 | 0.0143 | 95.0 | 11.85% | 4029.0 | 8.82% | motif file (matrix) |
svg |
57 |
| KLF5(Zf)/LoVo-KLF5-ChIP-Seq(GSE49402)/Homer | 1e-2 | -6.065e+00 | 0.0148 | 95.0 | 11.85% | 4037.0 | 8.83% | motif file (matrix) |
svg |
58 |
| Zfp281(Zf)/ES-Zfp281-ChIP-Seq(GSE81042)/Homer | 1e-2 | -6.004e+00 | 0.0155 | 16.0 | 2.00% | 402.3 | 0.88% | motif file (matrix) |
svg |
59 |
| HIF-1a(bHLH)/MCF7-HIF1a-ChIP-Seq(GSE28352)/Homer | 1e-2 | -5.922e+00 | 0.0165 | 30.0 | 3.74% | 975.5 | 2.13% | motif file (matrix) |
svg |
60 |
| KLF3(Zf)/MEF-Klf3-ChIP-Seq(GSE44748)/Homer | 1e-2 | -5.818e+00 | 0.0180 | 37.0 | 4.61% | 1290.3 | 2.82% | motif file (matrix) |
svg |
61 |
| SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer | 1e-2 | -5.541e+00 | 0.0234 | 56.0 | 6.98% | 2196.6 | 4.81% | motif file (matrix) |
svg |
62 |
| Nkx6.1(Homeobox)/Islet-Nkx6.1-ChIP-Seq(GSE40975)/Homer | 1e-2 | -5.448e+00 | 0.0253 | 75.0 | 9.35% | 3129.3 | 6.85% | motif file (matrix) |
svg |
63 |
| E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer | 1e-2 | -5.392e+00 | 0.0263 | 41.0 | 5.11% | 1508.3 | 3.30% | motif file (matrix) |
svg |
64 |
| Tcfcp2l1(CP2)/mES-Tcfcp2l1-ChIP-Seq(GSE11431)/Homer | 1e-2 | -5.274e+00 | 0.0291 | 11.0 | 1.37% | 248.4 | 0.54% | motif file (matrix) |
svg |
65 |
| RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer | 1e-2 | -5.254e+00 | 0.0293 | 44.0 | 5.49% | 1660.6 | 3.63% | motif file (matrix) |
svg |
66 |
| NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer | 1e-2 | -5.193e+00 | 0.0306 | 56.0 | 6.98% | 2235.8 | 4.89% | motif file (matrix) |
svg |
67 |
| Hoxc9(Homeobox)/Ainv15-Hoxc9-ChIP-Seq(GSE21812)/Homer | 1e-2 | -5.137e+00 | 0.0319 | 16.0 | 2.00% | 441.4 | 0.97% | motif file (matrix) |
svg |
68 |
| EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer | 1e-2 | -5.010e+00 | 0.0357 | 34.0 | 4.24% | 1222.8 | 2.68% | motif file (matrix) |
svg |
69 |
| IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer | 1e-2 | -4.863e+00 | 0.0408 | 19.0 | 2.37% | 577.9 | 1.26% | motif file (matrix) |
svg |
70 |
| Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer | 1e-2 | -4.750e+00 | 0.0450 | 29.0 | 3.62% | 1019.0 | 2.23% | motif file (matrix) |
svg |