Information for 9-CTGATAGCAA (Motif 9)

A G T C A C G T A T C G C G T A C G A T C G T A A C T G A G T C C G T A C T G A
Reverse Opposite:
A G C T A C G T T C A G G T A C G C A T G C T A C G A T A T G C C G T A A C T G
p-value:1e-10
log p-value:-2.510e+01
Information Content per bp:1.862
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.37%
Number of Background Sequences with motif30.8
Percentage of Background Sequences with motif0.07%
Average Position of motif in Targets53.5 +/- 26.3bp
Average Position of motif in Background44.0 +/- 28.1bp
Strand Bias (log2 ratio + to - strand density)-1.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0022.1_Gata5_1/Jaspar

Match Rank:1
Score:0.65
Offset:-4
Orientation:forward strand
Alignment:----CTGATAGCAA---
TAAACTGATAAGAAGAT
 A C G T A C G T A C G T A C G T A G T C A C G T A T C G C G T A C G A T C G T A A C T G A G T C C G T A C T G A A C G T A C G T A C G T
G C A T C G T A C G T A C T G A A G T C G C A T A C T G C G T A C G A T G C T A C G T A T A C G T C G A T C G A C A T G C G T A C A G T

PB0056.1_Rfxdc2_1/Jaspar

Match Rank:2
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-CTGATAGCAA----
CCGCATAGCAACGGA
 A C G T A G T C A C G T A T C G C G T A C G A T C G T A A C T G A G T C C G T A C T G A A C G T A C G T A C G T A C G T
A G T C A G T C T A C G A T G C G C T A G A C T T C G A C T A G G A T C C T G A T C G A A G T C T A C G T C A G C T G A

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-CTGATAGCAA
ACTGAAACCA-
 A C G T A G T C A C G T A T C G C G T A C G A T C G T A A C T G A G T C C G T A C T G A
G C T A T A G C A G C T A T C G G T C A C G T A G C T A A T G C G A T C C T G A A C G T

Dux/MA0611.1/Jaspar

Match Rank:4
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:CTGATAGCAA
TTGATTGN--
 A G T C A C G T A T C G C G T A C G A T C G T A A C T G A G T C C G T A C T G A
G A C T A C G T A C T G C G T A A C G T A C G T C T A G A T C G A C G T A C G T

GATA5/MA0766.1/Jaspar

Match Rank:5
Score:0.59
Offset:1
Orientation:forward strand
Alignment:CTGATAGCAA
-AGATAAGA-
 A G T C A C G T A T C G C G T A C G A T C G T A A C T G A G T C C G T A C T G A
A C G T G C T A A C T G C T G A A C G T G C T A C T G A T A C G T C G A A C G T

GATA2/MA0036.2/Jaspar

Match Rank:6
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-CTGATAGCAA---
NCAGATAAGAANNN
 A C G T A G T C A C G T A T C G C G T A C G A T C G T A A C T G A G T C C G T A C T G A A C G T A C G T A C G T
C G T A T A G C C G T A A C T G C G T A A C G T C G T A C T G A T A C G T C G A C G T A G A C T G A T C G C A T

PB0055.1_Rfx4_1/Jaspar

Match Rank:7
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-CTGATAGCAA----
TACCATAGCAACGGT
 A C G T A G T C A C G T A T C G C G T A C G A T C G T A A C T G A G T C C G T A C T G A A C G T A C G T A C G T A C G T
A G C T G T C A T A G C A T G C G T C A A G C T T C G A C T A G G A T C C T G A C T G A A G T C T A C G T C A G C G A T

PB0054.1_Rfx3_1/Jaspar

Match Rank:8
Score:0.58
Offset:-5
Orientation:forward strand
Alignment:-----CTGATAGCAA--------
TGTGACCCTTAGCAACCGATTAA
 A C G T A C G T A C G T A C G T A C G T A G T C A C G T A T C G C G T A C G A T C G T A A C T G A G T C C G T A C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
G A C T C A T G A G C T A T C G G T C A G A T C T G A C A T G C G A C T A G C T T C G A C T A G G A T C C T G A C G T A A G T C T A G C T C A G C G T A G C A T G C A T G C T A G C T A

GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:9
Score:0.58
Offset:1
Orientation:forward strand
Alignment:CTGATAGCAA
-AGATAASR-
 A G T C A C G T A T C G C G T A C G A T C G T A A C T G A G T C C G T A C T G A
A C G T G C T A A T C G G C T A G A C T G C T A T C G A T A G C T C G A A C G T

MEIS2/MA0774.1/Jaspar

Match Rank:10
Score:0.57
Offset:0
Orientation:forward strand
Alignment:CTGATAGCAA
TTGACAGC--
 A G T C A C G T A T C G C G T A C G A T C G T A A C T G A G T C C G T A C T G A
C G A T C A G T A C T G C G T A G T A C T G C A T A C G T A G C A C G T A C G T