Information for 14-CACATGTACATGC (Motif 22)

G A T C C T G A A G T C C G T A A C G T A C T G A C G T C G T A G T A C C G T A A C G T A C T G A G T C
Reverse Opposite:
C T A G A G T C C G T A A C G T A C T G A C G T C G T A G T A C C G T A A C G T A C T G A G C T C T A G
p-value:1e-3
log p-value:-8.876e+00
Information Content per bp:1.929
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif0.26%
Number of Background Sequences with motif1.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets59.8 +/- 34.5bp
Average Position of motif in Background50.5 +/- 17.3bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.50
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0087.1_Irx6/Jaspar

Match Rank:1
Score:0.68
Offset:-5
Orientation:reverse strand
Alignment:-----CACATGTACATGC
ANTTNTACATGTANTTN-
 A C G T A C G T A C G T A C G T A C G T G A T C C T G A A G T C C G T A A C G T A C T G A C G T C G T A G T A C C G T A A C G T A C T G A G T C
G C T A C G A T C G A T G C A T A C G T C G A T C G T A A G T C C G T A G C A T C T A G C G A T G C T A G A C T C G A T C G A T C G A T A C G T

PH0082.1_Irx2/Jaspar

Match Rank:2
Score:0.66
Offset:-5
Orientation:reverse strand
Alignment:-----CACATGTACATGC
ANTNTTACATGTATNTA-
 A C G T A C G T A C G T A C G T A C G T G A T C C T G A A G T C C G T A A C G T A C T G A C G T C G T A G T A C C G T A A C G T A C T G A G T C
C G T A T G C A G C A T G A C T G A C T C G A T C G T A A G T C C G T A G C A T T A C G C G A T G C T A G A C T G C A T C G A T G C T A A C G T

PH0084.1_Irx3_2/Jaspar

Match Rank:3
Score:0.66
Offset:-5
Orientation:reverse strand
Alignment:-----CACATGTACATGC
NNTATTACATGTANNNT-
 A C G T A C G T A C G T A C G T A C G T G A T C C T G A A G T C C G T A A C G T A C T G A C G T C G T A G T A C C G T A A C G T A C T G A G T C
G C A T C T G A G C A T G C T A A C G T C G A T C G T A G A T C C G T A G C A T C T A G C G A T G C T A C G A T G C T A G C A T G C A T A C G T

PH0086.1_Irx5/Jaspar

Match Rank:4
Score:0.65
Offset:-5
Orientation:reverse strand
Alignment:-----CACATGTACATGC
ANTNNTACATGTANNTN-
 A C G T A C G T A C G T A C G T A C G T G A T C C T G A A G T C C G T A A C G T A C T G A C G T C G T A G T A C C G T A A C G T A C T G A G T C
G C T A G T C A G C A T G C A T C A G T C G A T G C T A A G T C C G T A G C A T T C A G C G A T G C T A C G A T G C T A G C A T G C A T A C G T

PH0083.1_Irx3_1/Jaspar

Match Rank:5
Score:0.65
Offset:-5
Orientation:reverse strand
Alignment:-----CACATGTACATGC
ANTATTACATGTANNNN-
 A C G T A C G T A C G T A C G T A C G T G A T C C T G A A G T C C G T A A C G T A C T G A C G T C G T A G T A C C G T A A C G T A C T G A G T C
G C T A C T A G G C A T G C T A A C G T C G A T C G T A A G T C C G T A G C A T T A C G C G A T G C T A A G C T G C A T G A C T G C A T A C G T

PH0085.1_Irx4/Jaspar

Match Rank:6
Score:0.64
Offset:-4
Orientation:forward strand
Alignment:----CACATGTACATGC
AATATACATGTAAAACA
 A C G T A C G T A C G T A C G T G A T C C T G A A G T C C G T A A C G T A C T G A C G T C G T A G T A C C G T A A C G T A C T G A G T C
C G T A C G T A G C A T C T G A C G A T C G T A A G T C C G T A G C A T C T A G G C A T G C T A G T C A C G T A C G T A A G T C C G T A

OCT:OCT(POU,Homeobox)/NPC-OCT6-ChIP-Seq(GSE43916)/Homer

Match Rank:7
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:CACATGTACATGC---
-AYATGYATATGCATR
 G A T C C T G A A G T C C G T A A C G T A C T G A C G T C G T A G T A C C G T A A C G T A C T G A G T C A C G T A C G T A C G T
A C G T C T G A G A C T C T G A G A C T C T A G G A T C C T G A G A C T C T G A G A C T C T A G G A T C C T G A G C A T C T A G

POU2F2/MA0507.1/Jaspar

Match Rank:8
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:CACATGTACATGC-
-ATATGCAAATNNN
 G A T C C T G A A G T C C G T A A C G T A C T G A C G T C G T A G T A C C G T A A C G T A C T G A G T C A C G T
A C G T C G T A G A C T C T G A A C G T C T A G G A T C C G T A C G T A C G T A C G A T C A T G G T C A C T G A

Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:9
Score:0.59
Offset:3
Orientation:forward strand
Alignment:CACATGTACATGC
---ATGMATATDC
 G A T C C T G A A G T C C G T A A C G T A C T G A C G T C G T A G T A C C G T A A C G T A C T G A G T C
A C G T A C G T A C G T G C T A A C G T C T A G G T A C G C T A G A C T C T G A G C A T C A T G G A T C

OCT:OCT(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer

Match Rank:10
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:CACATGTACATGC--
CTCATGAATATTCAT
 G A T C C T G A A G T C C G T A A C G T A C T G A C G T C G T A G T A C C G T A A C G T A C T G A G T C A C G T A C G T
T A G C G A C T G A T C C G T A A C G T T C A G G T C A C G T A A C G T C G T A C G A T A C G T A G T C C G T A C G A T