Information for 5-GAAATGTAGT (Motif 8)

A C T G T G C A T C G A G T C A A C G T A C T G G A C T C G T A T C A G A G C T
Reverse Opposite:
C T G A A G T C G C A T C T G A A G T C G T C A C A G T A G C T A C G T T G A C
p-value:1e-11
log p-value:-2.747e+01
Information Content per bp:1.741
Number of Target Sequences with motif33.0
Percentage of Target Sequences with motif3.67%
Number of Background Sequences with motif368.2
Percentage of Background Sequences with motif0.79%
Average Position of motif in Targets50.8 +/- 28.2bp
Average Position of motif in Background50.2 +/- 31.1bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GFY(?)/Promoter/Homer

Match Rank:1
Score:0.73
Offset:-2
Orientation:reverse strand
Alignment:--GAAATGTAGT
GGGAATTGTAGT
 A C G T A C G T A C T G T G C A T C G A G T C A A C G T A C T G G A C T C G T A T C A G A G C T
C A T G T C A G T C A G T C G A T C G A G C A T A C G T A C T G A C G T C T G A A T C G A C G T

PH0084.1_Irx3_2/Jaspar

Match Rank:2
Score:0.68
Offset:-4
Orientation:forward strand
Alignment:----GAAATGTAGT---
AATATACATGTAATATA
 A C G T A C G T A C G T A C G T A C T G T G C A T C G A G T C A A C G T A C T G G A C T C G T A T C A G A G C T A C G T A C G T A C G T
C G T A C G T A C G A T C G T A C G A T C G T A G A T C C G T A G C A T C T A G C G A T G C T A T C G A C G A T C G T A G A C T C G A T

GFY-Staf(?,Zf)/Promoter/Homer

Match Rank:3
Score:0.67
Offset:-9
Orientation:reverse strand
Alignment:---------GAAATGTAGT-
GCATTCTGGGAATTGTAGTT
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G T G C A T C G A G T C A A C G T A C T G G A C T C G T A T C A G A G C T A C G T
T C A G T A G C G T C A A G C T A C G T A G T C A G C T A C T G A C T G C T A G C G T A C T G A C G A T A G C T A C T G A C G T C T G A A C T G A C G T A G C T

PH0083.1_Irx3_1/Jaspar

Match Rank:4
Score:0.66
Offset:-4
Orientation:forward strand
Alignment:----GAAATGTAGT---
AAAATACATGTAATACT
 A C G T A C G T A C G T A C G T A C T G T G C A T C G A G T C A A C G T A C T G G A C T C G T A T C A G A G C T A C G T A C G T A C G T
C G T A C T G A C G A T C T G A C G A T C G T A A G T C C G T A G C A T T A C G C G A T G C T A T G C A C G A T C G T A G A T C C G A T

Ronin(THAP)/ES-Thap11-ChIP-Seq(GSE51522)/Homer

Match Rank:5
Score:0.65
Offset:-9
Orientation:reverse strand
Alignment:---------GAAATGTAGT-
GCMTBCTGGGAGTTGTAGTY
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G T G C A T C G A G T C A A C G T A C T G G A C T C G T A T C A G A G C T A C G T
C A T G T A G C G T A C A G C T A C G T T G A C A G C T C T A G A C T G C T A G C G T A T C A G G C A T A G C T A C T G C G A T C T G A A C T G A C G T A G T C

PH0086.1_Irx5/Jaspar

Match Rank:6
Score:0.65
Offset:-5
Orientation:reverse strand
Alignment:-----GAAATGTAGT--
ANTNNTACATGTANNTN
 A C G T A C G T A C G T A C G T A C G T A C T G T G C A T C G A G T C A A C G T A C T G G A C T C G T A T C A G A G C T A C G T A C G T
G C T A G T C A G C A T G C A T C A G T C G A T G C T A A G T C C G T A G C A T T C A G C G A T G C T A C G A T G C T A G C A T G C A T

PH0082.1_Irx2/Jaspar

Match Rank:7
Score:0.64
Offset:-5
Orientation:reverse strand
Alignment:-----GAAATGTAGT--
ANTNTTACATGTATNTA
 A C G T A C G T A C G T A C G T A C G T A C T G T G C A T C G A G T C A A C G T A C T G G A C T C G T A T C A G A G C T A C G T A C G T
C G T A T G C A G C A T G A C T G A C T C G A T C G T A A G T C C G T A G C A T T A C G C G A T G C T A G A C T G C A T C G A T G C T A

PH0087.1_Irx6/Jaspar

Match Rank:8
Score:0.64
Offset:-5
Orientation:reverse strand
Alignment:-----GAAATGTAGT--
ANTTNTACATGTANTTN
 A C G T A C G T A C G T A C G T A C G T A C T G T G C A T C G A G T C A A C G T A C T G G A C T C G T A T C A G A G C T A C G T A C G T
G C T A C G A T C G A T G C A T A C G T C G A T C G T A A G T C C G T A G C A T C T A G C G A T G C T A G A C T C G A T C G A T C G A T

PH0085.1_Irx4/Jaspar

Match Rank:9
Score:0.64
Offset:-5
Orientation:reverse strand
Alignment:-----GAAATGTAGT--
NNTTTTACATGTANNNT
 A C G T A C G T A C G T A C G T A C G T A C T G T G C A T C G A G T C A A C G T A C T G G A C T C G T A T C A G A G C T A C G T A C G T
G C A T T A C G G C A T G C A T C A G T C G A T C G T A A G T C C G T A G C A T C T A G G C A T G C T A G A C T C G T A G C A T G C A T

TEAD1/MA0090.2/Jaspar

Match Rank:10
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--GAAATGTAGT
NTGGAATGTG--
 A C G T A C G T A C T G T G C A T C G A G T C A A C G T A C T G G A C T C G T A T C A G A G C T
C T G A G C A T T C A G C A T G C G T A T C G A C A G T A C T G A G C T C T A G A C G T A C G T