Information for 12-CCAAATCAGA (Motif 16)

A G T C A G T C G T C A C G T A C T G A G C A T A T G C C G T A A C T G G T C A
Reverse Opposite:
A C G T A G T C A C G T A T C G C G T A A G C T A C G T A C G T A C T G A C T G
p-value:1e-9
log p-value:-2.244e+01
Information Content per bp:1.868
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif1.56%
Number of Background Sequences with motif69.4
Percentage of Background Sequences with motif0.15%
Average Position of motif in Targets41.9 +/- 24.4bp
Average Position of motif in Background50.5 +/- 29.9bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Gfi1/MA0038.1/Jaspar

Match Rank:1
Score:0.68
Offset:1
Orientation:forward strand
Alignment:CCAAATCAGA-
-CAAATCACTG
 A G T C A G T C G T C A C G T A C T G A G C A T A T G C C G T A A C T G G T C A A C G T
A C G T A G T C T G C A C G T A C G T A C A G T G T A C G C T A T A G C G C A T T A C G

PB0121.1_Foxj3_2/Jaspar

Match Rank:2
Score:0.66
Offset:-4
Orientation:forward strand
Alignment:----CCAAATCAGA---
AACACCAAAACAAAGGA
 A C G T A C G T A C G T A C G T A G T C A G T C G T C A C G T A C T G A G C A T A T G C C G T A A C T G G T C A A C G T A C G T A C G T
G T C A C G T A A G T C C T G A G A T C G A T C T G C A G C T A G T C A C G T A A G T C C G T A C G T A G C T A C A T G T A C G C G T A

NFYA/MA0060.2/Jaspar

Match Rank:3
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---CCAAATCAGA-----
TGGACCAATCAGCACTCT
 A C G T A C G T A C G T A G T C A G T C G T C A C G T A C T G A G C A T A T G C C G T A A C T G G T C A A C G T A C G T A C G T A C G T A C G T
A G C T A T C G T C A G C T G A A T G C A G T C C G T A T C G A G A C T T A G C T C G A T C A G T G A C C T G A A T G C A C G T G T A C C G A T

NFYB/MA0502.1/Jaspar

Match Rank:4
Score:0.63
Offset:-6
Orientation:forward strand
Alignment:------CCAAATCAGA
AAATGGACCAATCAG-
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C A G T C G T C A C G T A C T G A G C A T A T G C C G T A A C T G G T C A
T C G A G T C A G T C A A G C T A T C G T C A G C T G A A G T C A G T C C G T A C T G A A C G T T A G C T C G A T A C G A C G T

NF1:FOXA1(CTF,Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:5
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--CCAAATCAGA----
TGCCAAAATAAACANN
 A C G T A C G T A G T C A G T C G T C A C G T A C T G A G C A T A T G C C G T A A C T G G T C A A C G T A C G T A C G T A C G T
C G A T A C T G T A G C G T A C C G T A C T G A C T G A C T G A G A C T G T C A G T C A C T G A A G T C C G T A C T G A G C T A

NFIC/MA0161.1/Jaspar

Match Rank:6
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--CCAAATCAGA
TGCCAA------
 A C G T A C G T A G T C A G T C G T C A C G T A C T G A G C A T A T G C C G T A A C T G G T C A
G C A T C A T G G A T C A G T C G T C A C T G A A C G T A C G T A C G T A C G T A C G T A C G T

Gfi1b/MA0483.1/Jaspar

Match Rank:7
Score:0.60
Offset:2
Orientation:forward strand
Alignment:CCAAATCAGA---
--AAATCACAGCA
 A G T C A G T C G T C A C G T A C T G A G C A T A T G C C G T A A C T G G T C A A C G T A C G T A C G T
A C G T A C G T T G C A C G T A C T G A A G C T A G T C G C T A T A G C C G T A C T A G G A T C G C T A

Dux/MA0611.1/Jaspar

Match Rank:8
Score:0.60
Offset:1
Orientation:forward strand
Alignment:CCAAATCAGA
-CCAATCAA-
 A G T C A G T C G T C A C G T A C T G A G C A T A T G C C G T A A C T G G T C A
A C G T A T G C A G T C C G T A C G T A A C G T A G T C C G T A C G T A A C G T

PH0037.1_Hdx/Jaspar

Match Rank:9
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----CCAAATCAGA---
AAGGCGAAATCATCGCA
 A C G T A C G T A C G T A C G T A G T C A G T C G T C A C G T A C T G A G C A T A T G C C G T A A C T G G T C A A C G T A C G T A C G T
C G T A C T G A A C T G C A T G G T A C C T A G T G C A C G T A C G T A A C G T A T G C G C T A G A C T G A T C A T C G G T A C T G C A

PH0026.1_Duxbl/Jaspar

Match Rank:10
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---CCAAATCAGA----
CGACCCAATCAACGGTG
 A C G T A C G T A C G T A G T C A G T C G T C A C G T A C T G A G C A T A T G C C G T A A C T G G T C A A C G T A C G T A C G T A C G T
A G T C C T A G C T G A A G T C A G T C A G T C G T C A G T C A A G C T A G T C C G T A C T G A A G T C T A C G T C A G G C A T T A C G