Information for 9-GSCAARATGGCTG (Motif 9)

A T C G A T G C A G T C C G T A C G T A C T A G C G T A A C G T A C T G A C T G A G T C A G C T A T C G
Reverse Opposite:
A T G C C T G A A C T G A G T C A G T C C G T A A C G T A G T C A C G T A C G T C T A G A T C G A T G C
p-value:1e-12
log p-value:-2.775e+01
Information Content per bp:1.911
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.89%
Number of Background Sequences with motif6.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets56.0 +/- 20.3bp
Average Position of motif in Background64.7 +/- 20.2bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

YY1/MA0095.2/Jaspar

Match Rank:1
Score:0.86
Offset:2
Orientation:forward strand
Alignment:GSCAARATGGCTG-
--CAAGATGGCGGC
 A T C G A T G C A G T C C G T A C G T A C T A G C G T A A C G T A C T G A C T G A G T C A G C T A T C G A C G T
A C G T A C G T T G A C C T G A T C G A T C A G C G T A A G C T C T A G C T A G G T A C A C T G T C A G G T A C

YY1(Zf)/Promoter/Homer

Match Rank:2
Score:0.81
Offset:2
Orientation:forward strand
Alignment:GSCAARATGGCTG-
--CAAGATGGCGGC
 A T C G A T G C A G T C C G T A C G T A C T A G C G T A A C G T A C T G A C T G A G T C A G C T A T C G A C G T
A C G T A C G T T A G C C G T A C T G A T A C G C G T A A C G T A C T G A C T G A G T C T A C G C T A G G T A C

YY2/MA0748.1/Jaspar

Match Rank:3
Score:0.62
Offset:4
Orientation:reverse strand
Alignment:GSCAARATGGCTG--
----TAATGGCGGNC
 A T C G A T G C A G T C C G T A C G T A C T A G C G T A A C G T A C T G A C T G A G T C A G C T A T C G A C G T A C G T
A C G T A C G T A C G T A C G T G C A T C T G A C G T A G C A T C T A G A C T G A T G C T A C G C T A G G C T A G A T C

PB0193.1_Tcfe2a_2/Jaspar

Match Rank:4
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--GSCAARATGGCTG--
AAGGCCAGATGGTCCGG
 A C G T A C G T A T C G A T G C A G T C C G T A C G T A C T A G C G T A A C G T A C T G A C T G A G T C A G C T A T C G A C G T A C G T
G C T A T C G A C T A G C A T G T A G C G T A C C T G A A C T G T C G A C G A T A C T G C A T G A G C T G A T C A T G C A T C G T C A G

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:5
Score:0.56
Offset:6
Orientation:forward strand
Alignment:GSCAARATGGCTG-
------TWGTCTGV
 A T C G A T G C A G T C C G T A C G T A C T A G C G T A A C G T A C T G A C T G A G T C A G C T A T C G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G

POL010.1_DCE_S_III/Jaspar

Match Rank:6
Score:0.56
Offset:8
Orientation:reverse strand
Alignment:GSCAARATGGCTG
--------NGCTN
 A T C G A T G C A G T C C G T A C G T A C T A G C G T A A C G T A C T G A C T G A G T C A G C T A T C G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G A C T G A G T C A C G T A T C G

ZNF675(Zf)/HEK293-ZNF675.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:7
Score:0.55
Offset:-5
Orientation:forward strand
Alignment:-----GSCAARATGGCTG
ARGAGGMCAAAATGW---
 A C G T A C G T A C G T A C G T A C G T A T C G A T G C A G T C C G T A C G T A C T A G C G T A A C G T A C T G A C T G A G T C A G C T A T C G
T G C A C T A G C T A G C T G A C A T G A C T G T G C A G A T C G T C A T G C A G T C A G T C A A G C T C T A G G C A T A C G T A C G T A C G T

MafF(bZIP)/HepG2-MafF-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:GSCAARATGGCTG-----
---AAAWWTGCTGACWWD
 A T C G A T G C A G T C C G T A C G T A C T A G C G T A A C G T A C T G A C T G A G T C A G C T A T C G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C T G A C G T A C G T A G C T A G C A T G C A T T C A G G T A C G C A T C A T G C G T A A T G C G C A T G C A T C A T G

PB0042.1_Mafk_1/Jaspar

Match Rank:9
Score:0.55
Offset:2
Orientation:forward strand
Alignment:GSCAARATGGCTG----
--TAAAAATGCTGACTT
 A T C G A T G C A G T C C G T A C G T A C T A G C G T A A C G T A C T G A C T G A G T C A G C T A T C G A C G T A C G T A C G T A C G T
A C G T A C G T C G A T C G T A C G T A C G T A G C T A C G T A G A C T C A T G G T A C G C A T C A T G C G T A A G T C G C A T G A C T

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:10
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:GSCAARATGGCTG
-AACAGATGGC--
 A T C G A T G C A G T C C G T A C G T A C T A G C G T A A C G T A C T G A C T G A G T C A G C T A T C G
A C G T C T G A T C G A A G T C G T C A A C T G T G C A G C A T A C T G A C T G A G T C A C G T A C G T