Information for 2-GGGGCGGAGC (Motif 3)

T C A G C A T G T A C G C A T G G A T C T A C G A C T G T C G A T C A G A T G C
Reverse Opposite:
T A C G A G T C A G C T T G A C A T G C C T A G G T A C A T G C G T A C A G T C
p-value:1e-15
log p-value:-3.617e+01
Information Content per bp:1.641
Number of Target Sequences with motif55.0
Percentage of Target Sequences with motif6.14%
Number of Background Sequences with motif733.9
Percentage of Background Sequences with motif1.63%
Average Position of motif in Targets50.8 +/- 27.3bp
Average Position of motif in Background47.6 +/- 35.3bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sp1(Zf)/Promoter/Homer

Match Rank:1
Score:0.89
Offset:-1
Orientation:reverse strand
Alignment:-GGGGCGGAGC-
GGGGGCGGGGCC
 A C G T T C A G C A T G T A C G C A T G G A T C T A C G A C T G T C G A T C A G A T G C A C G T
T C A G C A T G C T A G A C T G A C T G A G T C A C T G A C T G C T A G T A C G A G T C A T G C

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:2
Score:0.87
Offset:-2
Orientation:forward strand
Alignment:--GGGGCGGAGC
RGKGGGCGGAGC
 A C G T A C G T T C A G C A T G T A C G C A T G G A T C T A C G A C T G T C G A T C A G A T G C
C T G A T C A G C A G T C T A G A C T G C T A G G A T C A T C G A C T G C T G A T C A G G A T C

POL003.1_GC-box/Jaspar

Match Rank:3
Score:0.86
Offset:-2
Orientation:forward strand
Alignment:--GGGGCGGAGC--
AGGGGGCGGGGCTG
 A C G T A C G T T C A G C A T G T A C G C A T G G A T C T A C G A C T G T C G A T C A G A T G C A C G T A C G T
C G T A C T A G C A T G T C A G A C T G C T A G G T A C C T A G A C T G C T A G C A T G A G T C A G C T C A T G

KLF3(Zf)/MEF-Klf3-ChIP-Seq(GSE44748)/Homer

Match Rank:4
Score:0.84
Offset:-3
Orientation:reverse strand
Alignment:---GGGGCGGAGC--
NNVDGGGYGGGGCYN
 A C G T A C G T A C G T T C A G C A T G T A C G C A T G G A T C T A C G A C T G T C G A T C A G A T G C A C G T A C G T
T A C G T G A C T C A G C T G A A C T G A C T G A C T G A G C T A C T G A C T G C T A G A C T G A G T C A G T C C T G A

SP1/MA0079.3/Jaspar

Match Rank:5
Score:0.83
Offset:-1
Orientation:reverse strand
Alignment:-GGGGCGGAGC
GGGGGCGGGGC
 A C G T T C A G C A T G T A C G C A T G G A T C T A C G A C T G T C G A T C A G A T G C
T C A G C T A G C T A G A C T G A C T G G T A C C T A G A C T G C T A G T C A G T G A C

KLF5/MA0599.1/Jaspar

Match Rank:6
Score:0.82
Offset:0
Orientation:reverse strand
Alignment:GGGGCGGAGC
GGGGNGGGGC
 T C A G C A T G T A C G C A T G G A T C T A C G A C T G T C G A T C A G A T G C
C T A G C T A G A C T G A C T G G A T C A C T G C A T G C T A G C T A G T G A C

SP2/MA0516.1/Jaspar

Match Rank:7
Score:0.81
Offset:-5
Orientation:reverse strand
Alignment:-----GGGGCGGAGC
GGGNGGGGGCGGGGC
 A C G T A C G T A C G T A C G T A C G T T C A G C A T G T A C G C A T G G A T C T A C G A C T G T C G A T C A G A T G C
T A C G T A C G T A C G T C G A C T A G C T A G C T A G C T A G A C T G G T A C C T A G A T C G C T A G T C A G T A G C

KLF6(Zf)/PDAC-KLF6-ChIP-Seq(GSE64557)/Homer

Match Rank:8
Score:0.80
Offset:-1
Orientation:forward strand
Alignment:-GGGGCGGAGC-
MKGGGYGTGGCC
 A C G T T C A G C A T G T A C G C A T G G A T C T A C G A C T G T C G A T C A G A T G C A C G T
G T A C C A G T A C T G A C T G A C T G G A T C A C T G A C G T A C T G A C T G A G T C G A T C

KLF5(Zf)/LoVo-KLF5-ChIP-Seq(GSE49402)/Homer

Match Rank:9
Score:0.80
Offset:0
Orientation:forward strand
Alignment:GGGGCGGAGC
DGGGYGKGGC
 T C A G C A T G T A C G C A T G G A T C T A C G A C T G T C G A T C A G A T G C
C G T A C T A G A C T G A C T G G A C T C T A G C A G T C T A G C A T G G A T C

Klf4/MA0039.2/Jaspar

Match Rank:10
Score:0.80
Offset:0
Orientation:forward strand
Alignment:GGGGCGGAGC
TGGGTGGGGC
 T C A G C A T G T A C G C A T G G A T C T A C G A C T G T C G A T C A G A T G C
C G A T T C A G C T A G A T C G G A C T C A T G A C T G C T A G A C T G A G T C