Information for 15-GGACCAATGG (Motif 22)

C T A G C T A G G T C A A T G C G T A C C G T A C G T A A C G T A C T G C T A G
Reverse Opposite:
A G T C T G A C C G T A A C G T A C G T A C T G A T C G A C G T A G T C A G T C
p-value:1e-8
log p-value:-1.940e+01
Information Content per bp:1.855
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.12%
Number of Background Sequences with motif35.0
Percentage of Background Sequences with motif0.08%
Average Position of motif in Targets47.2 +/- 23.0bp
Average Position of motif in Background42.8 +/- 30.7bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SOX9/MA0077.1/Jaspar

Match Rank:1
Score:0.78
Offset:1
Orientation:reverse strand
Alignment:GGACCAATGG
-GAACAATGG
 C T A G C T A G G T C A A T G C G T A C C G T A C G T A A C G T A C T G C T A G
A C G T C T A G C G T A G C T A A G T C G C T A G C T A C G A T C T A G T A C G

NFY(CCAAT)/Promoter/Homer

Match Rank:2
Score:0.74
Offset:1
Orientation:forward strand
Alignment:GGACCAATGG-
-AGCCAATCGG
 C T A G C T A G G T C A A T G C G T A C C G T A C G T A A C G T A C T G C T A G A C G T
A C G T T C G A C T A G A G T C A G T C C G T A C G T A A C G T T A G C T C A G T A C G

Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer

Match Rank:3
Score:0.74
Offset:0
Orientation:reverse strand
Alignment:GGACCAATGG
VRAACAATGG
 C T A G C T A G G T C A A T G C G T A C C G T A C G T A A C G T A C T G C T A G
T G A C C T G A T C G A C G T A T A G C G T C A T C G A G C A T C T A G T A C G

Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer

Match Rank:4
Score:0.73
Offset:1
Orientation:reverse strand
Alignment:GGACCAATGG-
-GAACAATGGN
 C T A G C T A G G T C A A T G C G T A C C G T A C G T A A C G T A C T G C T A G A C G T
A C G T C T A G T C G A C G T A A G T C C G T A C G T A C G A T C T A G T C A G T A C G

NFYB/MA0502.1/Jaspar

Match Rank:5
Score:0.71
Offset:-4
Orientation:forward strand
Alignment:----GGACCAATGG-
AAATGGACCAATCAG
 A C G T A C G T A C G T A C G T C T A G C T A G G T C A A T G C G T A C C G T A C G T A A C G T A C T G C T A G A C G T
T C G A G T C A G T C A A G C T A T C G T C A G C T G A A G T C A G T C C G T A C T G A A C G T T A G C T C G A T A C G

PB0070.1_Sox30_1/Jaspar

Match Rank:6
Score:0.71
Offset:-2
Orientation:forward strand
Alignment:--GGACCAATGG----
AATGAACAATGGAATT
 A C G T A C G T C T A G C T A G G T C A A T G C G T A C C G T A C G T A A C G T A C T G C T A G A C G T A C G T A C G T A C G T
C T G A G C A T C A G T A T C G T C G A C G T A A G T C G C T A C T G A C G A T C A T G T C A G G C T A G T C A G A C T G A C T

PB0173.1_Sox21_2/Jaspar

Match Rank:7
Score:0.70
Offset:-4
Orientation:reverse strand
Alignment:----GGACCAATGG---
NNNNNGAACAATTGANN
 A C G T A C G T A C G T A C G T C T A G C T A G G T C A A T G C G T A C C G T A C G T A A C G T A C T G C T A G A C G T A C G T A C G T
A G C T G T C A C T A G G T A C A C T G T A C G T C G A C G T A A T G C C G T A T C G A G C A T C G A T T A C G T C G A A G C T A C G T

Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer

Match Rank:8
Score:0.70
Offset:1
Orientation:forward strand
Alignment:GGACCAATGG-
-RAACAATGGN
 C T A G C T A G G T C A A T G C G T A C C G T A C G T A A C G T A C T G C T A G A C G T
A C G T C T G A T C G A C G T A A T G C C G T A C G T A C G A T C T A G T C A G G A T C

Sox6/MA0515.1/Jaspar

Match Rank:9
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:GGACCAATGG
AAAACAATGG
 C T A G C T A G G T C A A T G C G T A C C G T A C G T A A C G T A C T G C T A G
T C G A C T G A T C G A C G T A A G T C C G T A C G T A C G A T C T A G T C A G

PB0183.1_Sry_2/Jaspar

Match Rank:10
Score:0.67
Offset:-4
Orientation:forward strand
Alignment:----GGACCAATGG---
TCACGGAACAATAGGTG
 A C G T A C G T A C G T A C G T C T A G C T A G G T C A A T G C G T A C C G T A C G T A A C G T A C T G C T A G A C G T A C G T A C G T
G A C T G A T C C G T A G T A C C A T G T C A G T G C A C G T A A G T C C T G A C G T A G C A T C T G A C T A G T C A G G A C T T A C G