Information for 14-RRCKTCWCKAKGG (Motif 20)

T C A G C T A G A G T C A C G T A C G T A G T C C G A T A G T C A C T G C G T A A C G T A C T G A C T G
Reverse Opposite:
A G T C A G T C G T C A A C G T T G A C A C T G C G T A C T A G C G T A G T C A A C T G A G T C A G T C
p-value:1e-9
log p-value:-2.096e+01
Information Content per bp:1.815
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.56%
Number of Background Sequences with motif2.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets47.2 +/- 16.2bp
Average Position of motif in Background72.6 +/- 25.2bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

EBF(EBF)/proBcell-EBF-ChIP-Seq(GSE21978)/Homer

Match Rank:1
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:RRCKTCWCKAKGG---
----TCCCNNGGGACN
 T C A G C T A G A G T C A C G T A C G T A G T C C G A T A G T C A C T G C G T A A C G T A C T G A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G A C T A G T C A G T C A G T C G A C T C T G A A C T G C T A G A C T G C T G A T A G C G A T C

PB0159.1_Rfx4_2/Jaspar

Match Rank:2
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:RRCKTCWCKAKGG--
NNNGTAACTANGNNA
 T C A G C T A G A G T C A C G T A C G T A G T C C G A T A G T C A C T G C G T A A C G T A C T G A C T G A C G T A C G T
A C G T A T G C A T C G A C T G G A C T G T C A C G T A G T A C A G C T G C T A C A T G A T C G T A C G C A G T C G T A

PB0160.1_Rfxdc2_2/Jaspar

Match Rank:3
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--RRCKTCWCKAKGG--
NTNNCGTATCCAAGTNN
 A C G T A C G T T C A G C T A G A G T C A C G T A C G T A G T C C G A T A G T C A C T G C G T A A C G T A C T G A C T G A C G T A C G T
C G T A C G A T G C A T A T G C A T G C C T A G G A C T G T C A C G A T A G T C A G T C C T G A G T C A T A C G A G C T T G C A T A C G

EBF1/MA0154.3/Jaspar

Match Rank:4
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:RRCKTCWCKAKGG---
--ANTCCCTNGGGAAT
 T C A G C T A G A G T C A C G T A C G T A G T C C G A T A G T C A C T G C G T A A C G T A C T G A C T G A C G T A C G T A C G T
A C G T A C G T C T G A C A G T G A C T G T A C A G T C A G T C G C A T C G A T C T A G T C A G T A C G C T G A T G C A G A C T

PB0055.1_Rfx4_1/Jaspar

Match Rank:5
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:RRCKTCWCKAKGG--
NNCGTTGCTATGGNN
 T C A G C T A G A G T C A C G T A C G T A G T C C G A T A G T C A C T G C G T A A C G T A C T G A C T G A C G T A C G T
G C T A A G T C A T G C C T A G A G C T G A C T C T A G A G T C A G C T C T G A C A G T T A C G A T C G C A G T T C G A

POL008.1_DCE_S_I/Jaspar

Match Rank:6
Score:0.54
Offset:1
Orientation:forward strand
Alignment:RRCKTCWCKAKGG
-GCTTCC------
 T C A G C T A G A G T C A C G T A C G T A G T C C G A T A G T C A C T G C G T A A C G T A C T G A C T G
A C G T A C T G A T G C A G C T A C G T A T G C A T G C A C G T A C G T A C G T A C G T A C G T A C G T

PB0158.1_Rfx3_2/Jaspar

Match Rank:7
Score:0.54
Offset:-4
Orientation:reverse strand
Alignment:----RRCKTCWCKAKGG------
NNTNGNNGTAACCAAGNNNNAGN
 A C G T A C G T A C G T A C G T T C A G C T A G A G T C A C G T A C G T A G T C C G A T A G T C A C T G C G T A A C G T A C T G A C T G A C G T A C G T A C G T A C G T A C G T A C G T
T A G C G C A T A G C T A G C T A C T G A G C T A C T G C A T G G A C T G T C A G C T A T A G C A G T C C G T A C G T A T A C G A T C G T A C G C G A T T A G C T G C A C T A G A C G T

RFX3/MA0798.1/Jaspar

Match Rank:8
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:RRCKTCWCKAKGG-----
--CGTTGCCATGGCAACN
 T C A G C T A G A G T C A C G T A C G T A G T C C G A T A G T C A C T G C G T A A C G T A C T G A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A T G C C T A G A G C T G C A T C T A G A G T C A G T C C G T A G C A T T C A G T C A G G A T C C G T A C T G A G A T C T A C G

Rfx1/MA0509.1/Jaspar

Match Rank:9
Score:0.53
Offset:3
Orientation:reverse strand
Alignment:RRCKTCWCKAKGG----
---GTTGCCATGGNAAC
 T C A G C T A G A G T C A C G T A C G T A G T C C G A T A G T C A C T G C G T A A C G T A C T G A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C T G A G C T G A C T C A T G A G T C A G T C C G T A C G A T C T A G T C A G T G A C C T G A T G C A G A T C

CREB1/MA0018.2/Jaspar

Match Rank:10
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-RRCKTCWCKAKGG
TGACGTCA------
 A C G T T C A G C T A G A G T C A C G T A C G T A G T C C G A T A G T C A C T G C G T A A C G T A C T G A C T G
G C A T A C T G C T G A A G T C A T C G A C G T A T G C T C G A A C G T A C G T A C G T A C G T A C G T A C G T