Information for 2-GGAGCATGCGGGAAAC (Motif 2)

C T A G A C T G G T C A A C T G A G T C G T C A A C G T A T C G A T G C A C T G T A C G A T C G C T G A G T C A G T C A A G T C
Reverse Opposite:
C T A G A C G T A C G T G A C T A T G C A T G C A G T C T A C G A T G C C G T A A C G T A C T G G T A C A C G T A G T C A G T C
p-value:1e-15
log p-value:-3.652e+01
Information Content per bp:1.752
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.12%
Number of Background Sequences with motif6.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets59.8 +/- 28.4bp
Average Position of motif in Background59.4 +/- 22.9bp
Strand Bias (log2 ratio + to - strand density)1.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NRF1/MA0506.1/Jaspar

Match Rank:1
Score:0.67
Offset:1
Orientation:forward strand
Alignment:GGAGCATGCGGGAAAC
-GCGCCTGCGCA----
 C T A G A C T G G T C A A C T G A G T C G T C A A C G T A T C G A T G C A C T G T A C G A T C G C T G A G T C A G T C A A G T C
A C G T T C A G G T A C T C A G A T G C T G A C A C G T A C T G A G T C A T C G G T A C T C G A A C G T A C G T A C G T A C G T

NRF(NRF)/Promoter/Homer

Match Rank:2
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:GGAGCATGCGGGAAAC
-GCGCATGCGCAC---
 C T A G A C T G G T C A A C T G A G T C G T C A A C G T A T C G A T G C A C T G T A C G A T C G C T G A G T C A G T C A A G T C
A C G T A C T G A G T C A C T G A G T C C G T A A C G T A C T G A G T C A C T G A G T C C T G A T A G C A C G T A C G T A C G T

NRF1(NRF)/MCF7-NRF1-ChIP-Seq(Unpublished)/Homer

Match Rank:3
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:GGAGCATGCGGGAAAC
-GCGCATGCGCAG---
 C T A G A C T G G T C A A C T G A G T C G T C A A C G T A T C G A T G C A C T G T A C G A T C G C T G A G T C A G T C A A G T C
A C G T T C A G T G A C C T A G T A G C T G C A A C G T T A C G A G T C A C T G A G T C T C G A T A C G A C G T A C G T A C G T

GCM2/MA0767.1/Jaspar

Match Rank:4
Score:0.59
Offset:4
Orientation:forward strand
Alignment:GGAGCATGCGGGAAAC
----TATGCGGGTA--
 C T A G A C T G G T C A A C T G A G T C G T C A A C G T A T C G A T G C A C T G T A C G A T C G C T G A G T C A G T C A A G T C
A C G T A C G T A C G T A C G T A C G T T C G A A G C T T C A G A T G C C A T G A C T G C T A G G A C T C T G A A C G T A C G T

GCM1/MA0646.1/Jaspar

Match Rank:5
Score:0.58
Offset:4
Orientation:forward strand
Alignment:GGAGCATGCGGGAAAC
----CATGCGGGTAC-
 C T A G A C T G G T C A A C T G A G T C G T C A A C G T A T C G A T G C A C T G T A C G A T C G C T G A G T C A G T C A A G T C
A C G T A C G T A C G T A C G T A G T C T C G A G C A T T C A G G T A C C A T G A C T G A T C G A G C T T C G A A T G C A C G T

POL013.1_MED-1/Jaspar

Match Rank:6
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-GGAGCATGCGGGAAAC
CGGAGC-----------
 A C G T C T A G A C T G G T C A A C T G A G T C G T C A A C G T A T C G A T G C A C T G T A C G A T C G C T G A G T C A G T C A A G T C
A T G C A C T G A C T G C G T A A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0024.1_Gcm1_1/Jaspar

Match Rank:7
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:GGAGCATGCGGGAAAC-
-NNNNATGCGGGTNNNN
 C T A G A C T G G T C A A C T G A G T C G T C A A C G T A T C G A T G C A C T G T A C G A T C G C T G A G T C A G T C A A G T C A C G T
A C G T G T C A C T G A G C A T A C T G T C G A G A C T T C A G A T G C C A T G A C T G A C T G A G C T C G T A A G T C A C T G C G T A

PB0088.1_Tcfap2e_1/Jaspar

Match Rank:8
Score:0.55
Offset:0
Orientation:forward strand
Alignment:GGAGCATGCGGGAAAC
ATTGCCTGAGGCAAT-
 C T A G A C T G G T C A A C T G A G T C G T C A A C G T A T C G A T G C A C T G T A C G A T C G C T G A G T C A G T C A A G T C
G C T A G C A T G C A T A T C G A G T C A G T C A G C T A T C G T C G A T C A G A C T G T A G C C T A G G C T A C G A T A C G T

TFAP2A/MA0003.3/Jaspar

Match Rank:9
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:GGAGCATGCGGGAAAC
--NGCCTGAGGCN---
 C T A G A C T G G T C A A C T G A G T C G T C A A C G T A T C G A T G C A C T G T A C G A T C G C T G A G T C A G T C A A G T C
A C G T A C G T G C A T A T C G A T G C A G T C A C G T A T C G T C G A T C A G A T C G A T G C C A T G A C G T A C G T A C G T

PB0190.1_Tcfap2b_2/Jaspar

Match Rank:10
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:GGAGCATGCGGGAAAC
ANTGCCTGAGGCAAN-
 C T A G A C T G G T C A A C T G A G T C G T C A A C G T A T C G A T G C A C T G T A C G A T C G C T G A G T C A G T C A A G T C
C G T A C A G T G A C T C A T G G A T C G A T C C A G T T A C G T G C A C A T G C A T G A G T C C G T A G T C A G A C T A C G T