Information for 13-TTGGGAGCGA (Motif 19)

C G A T A C G T A C T G A C T G A C T G G T C A A C T G A G T C A C T G C G T A
Reverse Opposite:
A C G T A G T C A C T G A G T C A C G T A G T C A G T C A G T C C G T A C G T A
p-value:1e-9
log p-value:-2.156e+01
Information Content per bp:1.938
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.78%
Number of Background Sequences with motif8.2
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets49.7 +/- 19.3bp
Average Position of motif in Background45.7 +/- 29.3bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL013.1_MED-1/Jaspar

Match Rank:1
Score:0.70
Offset:2
Orientation:reverse strand
Alignment:TTGGGAGCGA
--CGGAGC--
 C G A T A C G T A C T G A C T G A C T G G T C A A C T G A G T C A C T G C G T A
A C G T A C G T A T G C A C T G A C T G C G T A A C T G A G T C A C G T A C G T

E2F3(E2F)/MEF-E2F3-ChIP-Seq(GSE71376)/Homer

Match Rank:2
Score:0.64
Offset:0
Orientation:forward strand
Alignment:TTGGGAGCGA--
BTKGGCGGGAAA
 C G A T A C G T A C T G A C T G A C T G G T C A A C T G A G T C A C T G C G T A A C G T A C G T
A C T G A C G T C A T G A T C G A T C G T G A C A C T G A T C G A T C G T G C A C T G A C G T A

PB0167.1_Sox13_2/Jaspar

Match Rank:3
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---TTGGGAGCGA----
GTATTGGGTGGGTAATT
 A C G T A C G T A C G T C G A T A C G T A C T G A C T G A C T G G T C A A C T G A G T C A C T G C G T A A C G T A C G T A C G T A C G T
C T A G C G A T C T G A G A C T A G C T C A T G C A T G C T A G G C A T A C T G C A T G C A T G C G A T G C T A G C A T G C A T C A G T

E2F6/MA0471.1/Jaspar

Match Rank:4
Score:0.61
Offset:2
Orientation:forward strand
Alignment:TTGGGAGCGA---
--GGGCGGGAAGG
 C G A T A C G T A C T G A C T G A C T G G T C A A C T G A G T C A C T G C G T A A C G T A C G T A C G T
A C G T A C G T C T A G T C A G A C T G G T A C C T A G A C T G T A C G C G T A C T G A T C A G T C A G

E2F1/MA0024.3/Jaspar

Match Rank:5
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:TTGGGAGCGA--
TTTGGCGCCAAA
 C G A T A C G T A C T G A C T G A C T G G T C A A C T G A G T C A C T G C G T A A C G T A C G T
G C A T C G A T C A G T T C A G A T C G A T G C C T A G A T G C A T G C G C T A G C T A C G T A

KLF5/MA0599.1/Jaspar

Match Rank:6
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:TTGGGAGCGA-
-GGGGNGGGGC
 C G A T A C G T A C T G A C T G A C T G G T C A A C T G A G T C A C T G C G T A A C G T
A C G T C T A G C T A G A C T G A C T G G A T C A C T G C A T G C T A G C T A G T G A C

POL011.1_XCPE1/Jaspar

Match Rank:7
Score:0.58
Offset:2
Orientation:forward strand
Alignment:TTGGGAGCGA--
--GGGCGGGACC
 C G A T A C G T A C T G A C T G A C T G G T C A A C T G A G T C A C T G C G T A A C G T A C G T
A C G T A C G T A C T G A T C G A C T G A G T C A C T G A C T G C T A G C G T A A T G C G T A C

E2F4/MA0470.1/Jaspar

Match Rank:8
Score:0.58
Offset:2
Orientation:forward strand
Alignment:TTGGGAGCGA---
--GGGCGGGAAGG
 C G A T A C G T A C T G A C T G A C T G G T C A A C T G A G T C A C T G C G T A A C G T A C G T A C G T
A C G T A C G T A C T G T A C G A T C G A G T C A C T G T A C G T A C G C T G A C T G A T C A G T C A G

E2F8/MA0865.1/Jaspar

Match Rank:9
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:TTGGGAGCGA--
TTTGGCGGGAAA
 C G A T A C G T A C T G A C T G A C T G G T C A A C T G A G T C A C T G C G T A A C G T A C G T
C G A T A C G T A G C T A T C G C T A G A T G C A T C G C T A G C T A G G T C A C T G A C G T A

PB0076.1_Sp4_1/Jaspar

Match Rank:10
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---TTGGGAGCGA----
NNNAAGGGGGCGGGNNN
 A C G T A C G T A C G T C G A T A C G T A C T G A C T G A C T G G T C A A C T G A G T C A C T G C G T A A C G T A C G T A C G T A C G T
T A C G T C G A A T C G C T G A C T G A C T A G C A T G C T A G A T C G A C T G G A T C A C T G A C T G C A T G C T G A G A T C T G A C