Information for 11-GCGGCCTTCTGGG (Motif 13)

A C T G A T G C C T A G A C T G A T G C G A T C G A C T C G A T A T G C C G A T A C T G C T A G A C T G
Reverse Opposite:
A G T C A G T C A G T C C G T A A T C G C G T A C G T A C A T G T A C G G T A C A G T C T A C G G T A C
p-value:1e-11
log p-value:-2.601e+01
Information Content per bp:1.770
Number of Target Sequences with motif15.0
Percentage of Target Sequences with motif1.67%
Number of Background Sequences with motif62.9
Percentage of Background Sequences with motif0.14%
Average Position of motif in Targets63.2 +/- 23.8bp
Average Position of motif in Background51.3 +/- 31.5bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer

Match Rank:1
Score:0.73
Offset:2
Orientation:reverse strand
Alignment:GCGGCCTTCTGGG----
--RGSMTBCTGGGAAAT
 A C T G A T G C C T A G A C T G A T G C G A T C G A C T C G A T A T G C C G A T A C T G C T A G A C T G A C G T A C G T A C G T A C G T
A C G T A C G T C T A G A C T G T A G C G T C A A G C T A G C T T G A C G A C T A C T G A C T G A C T G C G T A T C G A C G T A A C G T

PLAG1/MA0163.1/Jaspar

Match Rank:2
Score:0.66
Offset:0
Orientation:forward strand
Alignment:GCGGCCTTCTGGG-
GGGGCCCAAGGGGG
 A C T G A T G C C T A G A C T G A T G C G A T C G A C T C G A T A T G C C G A T A C T G C T A G A C T G A C G T
A C T G C T A G A C T G A C T G A T G C A G T C G T A C C G T A T G C A C A T G A C T G A C T G A C T G C T A G

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:3
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-GCGGCCTTCTGGG-
GGCCYCCTGCTGDGH
 A C G T A C T G A T G C C T A G A C T G A T G C G A T C G A C T C G A T A T G C C G A T A C T G C T A G A C T G A C G T
C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C

YY1(Zf)/Promoter/Homer

Match Rank:4
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:GCGGCCTTCTGGG
GCCGCCATCTTG-
 A C T G A T G C C T A G A C T G A T G C G A T C G A C T C G A T A T G C C G A T A C T G C T A G A C T G
C A T G G A T C A T G C C T A G A G T C A G T C C G T A A C G T A T G C A G C T A C G T A T C G A C G T

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:5
Score:0.61
Offset:5
Orientation:forward strand
Alignment:GCGGCCTTCTGGG--
-----WDNCTGGGCA
 A C T G A T G C C T A G A C T G A T G C G A T C G A C T C G A T A T G C C G A T A C T G C T A G A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A

PB0205.1_Zic1_2/Jaspar

Match Rank:6
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:GCGGCCTTCTGGG---
-TNTCCTGCTGTGNNG
 A C T G A T G C C T A G A C T G A T G C G A T C G A C T C G A T A T G C C G A T A C T G C T A G A C T G A C G T A C G T A C G T
A C G T G C A T A G T C C A G T T G A C G T A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G C A T C A T G T C A G

TFAP2B(var.3)/MA0813.1/Jaspar

Match Rank:7
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:GCGGCCTTCTGGG--
--TGCCCTNAGGGCA
 A C T G A T G C C T A G A C T G A T G C G A T C G A C T C G A T A T G C C G A T A C T G C T A G A C T G A C G T A C G T
A C G T A C G T G C A T A T C G A G T C A G T C A G T C A G C T T G A C T C G A T C A G A C T G A C T G A T G C C G T A

PB0193.1_Tcfe2a_2/Jaspar

Match Rank:8
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-GCGGCCTTCTGGG---
CCNNACCATCTGGCCTN
 A C G T A C T G A T G C C T A G A C T G A T G C G A T C G A C T C G A T A T G C C G A T A C T G C T A G A C T G A C G T A C G T A C G T
A G T C T A G C T A C G C T A G T C G A G T A C A G T C C G T A A G C T T G A C A G C T C A T G A T C G G T A C G A T C A G C T C A G T

PB0206.1_Zic2_2/Jaspar

Match Rank:9
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:GCGGCCTTCTGGG---
-TCNCCTGCTGNGNNN
 A C T G A T G C C T A G A C T G A T G C G A T C G A C T C G A T A T G C C G A T A C T G C T A G A C T G A C G T A C G T A C G T
A C G T G C A T A G T C A C G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G A C T C A T G C T A G

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:10
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:GCGGCCTTCTGGG
-CCCCCTGCTGTG
 A C T G A T G C C T A G A C T G A T G C G A T C G A C T C G A T A T G C C G A T A C T G C T A G A C T G
A C G T G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G