Information for 5-CAGGTTTGAA (Motif 10)

A T G C T G C A C T A G A C T G C G A T A G C T A G C T A T C G C G T A G T C A
Reverse Opposite:
A C G T C G A T A T G C C T G A C T G A G C T A T G A C A G T C A C G T A T C G
p-value:1e-11
log p-value:-2.718e+01
Information Content per bp:1.838
Number of Target Sequences with motif15.0
Percentage of Target Sequences with motif1.67%
Number of Background Sequences with motif57.6
Percentage of Background Sequences with motif0.13%
Average Position of motif in Targets44.8 +/- 21.5bp
Average Position of motif in Background48.7 +/- 31.6bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:1
Score:0.73
Offset:4
Orientation:reverse strand
Alignment:CAGGTTTGAA----
----TTTGAAACCG
 A T G C T G C A C T A G A C T G C G A T A G C T A G C T A T C G C G T A G T C A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G C G T A C T G A C G T A G T A C A G T C A T C G

LIN54/MA0619.1/Jaspar

Match Rank:2
Score:0.72
Offset:3
Orientation:forward strand
Alignment:CAGGTTTGAA--
---ATTTGAATT
 A T G C T G C A C T A G A C T G C G A T A G C T A G C T A T C G C G T A G T C A A C G T A C G T
A C G T A C G T A C G T C G T A A C G T A C G T A G C T C T A G C G T A C G T A G A C T G A C T

TBR1/MA0802.1/Jaspar

Match Rank:3
Score:0.72
Offset:1
Orientation:forward strand
Alignment:CAGGTTTGAA-
-AGGTGTGAAA
 A T G C T G C A C T A G A C T G C G A T A G C T A G C T A T C G C G T A G T C A A C G T
A C G T C T G A C T A G A T C G A G C T A T C G G A C T A C T G C T G A G C T A G C T A

TBX21/MA0690.1/Jaspar

Match Rank:4
Score:0.69
Offset:0
Orientation:forward strand
Alignment:CAGGTTTGAA
AAGGTGTGAA
 A T G C T G C A C T A G A C T G C G A T A G C T A G C T A T C G C G T A G T C A
C T G A C T G A C T A G A C T G A G C T C A T G G A C T A C T G C T G A G C T A

TBX15/MA0803.1/Jaspar

Match Rank:5
Score:0.69
Offset:1
Orientation:forward strand
Alignment:CAGGTTTGAA
-AGGTGTGA-
 A T G C T G C A C T A G A C T G C G A T A G C T A G C T A T C G C G T A G T C A
A C G T C T G A C T A G T C A G A C G T A T C G A G C T A C T G C T G A A C G T

TBX20/MA0689.1/Jaspar

Match Rank:6
Score:0.68
Offset:0
Orientation:forward strand
Alignment:CAGGTTTGAA-
TAGGTGTGAAG
 A T G C T G C A C T A G A C T G C G A T A G C T A G C T A T C G C G T A G T C A A C G T
C G A T C T G A T C A G A C T G A C G T A C T G C A G T C A T G C G T A C G T A T C A G

TBX1/MA0805.1/Jaspar

Match Rank:7
Score:0.68
Offset:1
Orientation:forward strand
Alignment:CAGGTTTGAA
-AGGTGTGA-
 A T G C T G C A C T A G A C T G C G A T A G C T A G C T A T C G C G T A G T C A
A C G T C T G A T C A G A C T G A G C T A T C G G A C T A C T G T G C A A C G T

PB0013.1_Eomes_1/Jaspar

Match Rank:8
Score:0.68
Offset:-3
Orientation:forward strand
Alignment:---CAGGTTTGAA----
GAAAAGGTGTGAAAATT
 A C G T A C G T A C G T A T G C T G C A C T A G A C T G C G A T A G C T A G C T A T C G C G T A G T C A A C G T A C G T A C G T A C G T
A C G T T C G A G C T A C T G A C T G A C T A G A C T G A G C T C T A G G A C T A C T G C T G A G T C A G T C A G C T A G A C T G A C T

EOMES/MA0800.1/Jaspar

Match Rank:9
Score:0.67
Offset:0
Orientation:forward strand
Alignment:CAGGTTTGAA---
AAGGTGTGAAAAT
 A T G C T G C A C T A G A C T G C G A T A G C T A G C T A T C G C G T A G T C A A C G T A C G T A C G T
C T G A C T G A C T A G A C T G A G C T T C A G G A C T A C T G T C G A G C T A G T C A C G T A G A C T

MGA/MA0801.1/Jaspar

Match Rank:10
Score:0.66
Offset:1
Orientation:forward strand
Alignment:CAGGTTTGAA
-AGGTGTGA-
 A T G C T G C A C T A G A C T G C G A T A G C T A G C T A T C G C G T A G T C A
A C G T C T G A T C A G A T C G A G C T C T A G G A C T A C T G C T G A A C G T