Information for 4-TGCCTTCAGAGSCTGC (Motif 7)

A C G T A C T G A G T C A G T C A G C T G A C T A T G C G T C A A T C G C G T A A C T G A T C G A T G C A C G T A C T G A G T C
Reverse Opposite:
A C T G G T A C C G T A A T C G A T C G A G T C A C G T A T G C A C G T A T C G C G T A C T G A A C T G A C T G A G T C C G T A
p-value:1e-11
log p-value:-2.746e+01
Information Content per bp:1.840
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.79%
Number of Background Sequences with motif2.4
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets47.8 +/- 21.5bp
Average Position of motif in Background47.7 +/- 29.3bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TFAP2B(var.3)/MA0813.1/Jaspar

Match Rank:1
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:TGCCTTCAGAGSCTGC
TGCCCTNAGGGCA---
 A C G T A C T G A G T C A G T C A G C T G A C T A T G C G T C A A T C G C G T A A C T G A T C G A T G C A C G T A C T G A G T C
G C A T A T C G A G T C A G T C A G T C A G C T T G A C T C G A T C A G A C T G A C T G A T G C C G T A A C G T A C G T A C G T

TFAP2A(var.3)/MA0872.1/Jaspar

Match Rank:2
Score:0.56
Offset:0
Orientation:forward strand
Alignment:TGCCTTCAGAGSCTGC
TGCCCTGAGGGCA---
 A C G T A C T G A G T C A G T C A G C T G A C T A T G C G T C A A T C G C G T A A C T G A T C G A T G C A C G T A C T G A G T C
G C A T A T C G A G T C A G T C A G T C A G C T A T C G T C G A T C A G A C T G A C T G A T G C C G T A A C G T A C G T A C G T

TFAP2C(var.3)/MA0815.1/Jaspar

Match Rank:3
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:TGCCTTCAGAGSCTGC
TGCCCTNAGGGCA---
 A C G T A C T G A G T C A G T C A G C T G A C T A T G C G T C A A T C G C G T A A C T G A T C G A T G C A C G T A C T G A G T C
G C A T A T C G A G T C A G T C A G T C A G C T T A G C T C G A T C A G A C T G A C T G A T G C C G T A A C G T A C G T A C G T

THAP1/MA0597.1/Jaspar

Match Rank:4
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-TGCCTTCAGAGSCTGC
CTGCCCGCA--------
 A C G T A C G T A C T G A G T C A G T C A G C T G A C T A T G C G T C A A T C G C G T A A C T G A T C G A T G C A C G T A C T G A G T C
A G T C G A C T C A T G G A T C G T A C G T A C C A T G A G T C G T C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

HIC2/MA0738.1/Jaspar

Match Rank:5
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-TGCCTTCAGAGSCTGC
ATGCCCACC--------
 A C G T A C G T A C T G A G T C A G T C A G C T G A C T A T G C G T C A A T C G C G T A A C T G A T C G A T G C A C G T A C T G A G T C
T C G A A G C T T C A G T G A C G T A C G T A C T C G A T A G C A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Hic1/MA0739.1/Jaspar

Match Rank:6
Score:0.51
Offset:-1
Orientation:forward strand
Alignment:-TGCCTTCAGAGSCTGC
ATGCCAACC--------
 A C G T A C G T A C T G A G T C A G T C A G C T G A C T A T G C G T C A A T C G C G T A A C T G A T C G A T G C A C G T A C T G A G T C
T C G A A G C T T C A G T A G C G T A C G T C A T C G A A T G C A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:7
Score:0.50
Offset:-5
Orientation:reverse strand
Alignment:-----TGCCTTCAGAGSCTGC
NNACTTGCCTT----------
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C A G T C A G C T G A C T A T G C G T C A A T C G C G T A A C T G A T C G A T G C A C G T A C T G A G T C
T C G A G A T C T G C A A G T C G A C T A G C T A C T G A G T C G A T C G C A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:8
Score:0.49
Offset:3
Orientation:reverse strand
Alignment:TGCCTTCAGAGSCTGC
---CTTGAGTGGCT--
 A C G T A C T G A G T C A G T C A G C T G A C T A T G C G T C A A T C G C G T A A C T G A T C G A T G C A C G T A C T G A G T C
A C G T A C G T A C G T A T G C G A C T C A G T C T A G C G T A A C T G C G A T A C T G A T C G G A T C G A C T A C G T A C G T

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:9
Score:0.48
Offset:1
Orientation:reverse strand
Alignment:TGCCTTCAGAGSCTGC-----
-GCCASCAGGGGGCGCYVNNG
 A C G T A C T G A G T C A G T C A G C T G A C T A T G C G T C A A T C G C G T A A C T G A T C G A T G C A C G T A C T G A G T C A C G T A C G T A C G T A C G T A C G T
A C G T C T A G T A G C A G T C C G T A T A G C G A T C C G T A A C T G C T A G C A T G A C T G A C T G G T A C C T A G A T G C G A T C T C A G A C T G T C A G A T C G

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.48
Offset:-1
Orientation:forward strand
Alignment:-TGCCTTCAGAGSCTGC
ATGCCCTGAGGC-----
 A C G T A C G T A C T G A G T C A G T C A G C T G A C T A T G C G T C A A T C G C G T A A C T G A T C G A T G C A C G T A C T G A G T C
G C T A C G A T C A T G A T G C A G T C A G T C G A C T T A C G T C G A C T A G A C T G T A G C A C G T A C G T A C G T A C G T A C G T