Information for 2-TGTGCTCTGHTCCCCA (Motif 4)

A C G T A T C G G C A T A T C G A G T C A C G T A G T C A C G T A C T G G A T C A G C T A G T C A G T C A G T C G T A C G T C A
Reverse Opposite:
A C G T A C T G A C T G C T A G A C T G C T G A C A T G A G T C C G T A A C T G G T C A A C T G A T G C C G T A T A G C C G T A
p-value:1e-12
log p-value:-2.806e+01
Information Content per bp:1.811
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.93%
Number of Background Sequences with motif4.1
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets47.0 +/- 26.4bp
Average Position of motif in Background61.1 +/- 22.0bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NR2C2/MA0504.1/Jaspar

Match Rank:1
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:TGTGCTCTGHTCCCCA
TGACCTCTGACCCCN-
 A C G T A T C G G C A T A T C G A G T C A C G T A G T C A C G T A C T G G A T C A G C T A G T C A G T C A G T C G T A C G T C A
G A C T T C A G T G C A G T A C A G T C A G C T A G T C G A C T T A C G G T C A G T A C T G A C A G T C A G T C A C G T A C G T

TR4(NR),DR1/Hela-TR4-ChIP-Seq(GSE24685)/Homer

Match Rank:2
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:TGTGCTCTGHTCCCCA
TGACCTTTGACCTC--
 A C G T A T C G G C A T A T C G A G T C A C G T A G T C A C G T A C T G G A T C A G C T A G T C A G T C A G T C G T A C G T C A
G A C T T A C G T G C A G T A C G A T C A G C T G A C T G A C T T A C G T G C A G T A C G A T C G A C T A G T C A C G T A C G T

RXRB/MA0855.1/Jaspar

Match Rank:3
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:TGTGCTCTGHTCCCCA
TGACCTTTGACCCC--
 A C G T A T C G G C A T A T C G A G T C A C G T A G T C A C G T A C T G G A T C A G C T A G T C A G T C A G T C G T A C G T C A
A G C T T C A G T G C A G T A C G T A C A G C T G A C T G A C T T C A G T G C A G T A C G A T C A G T C A G T C A C G T A C G T

RXRG/MA0856.1/Jaspar

Match Rank:4
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:TGTGCTCTGHTCCCCA
TGACCTTTGACCCC--
 A C G T A T C G G C A T A T C G A G T C A C G T A G T C A C G T A C T G G A T C A G C T A G T C A G T C A G T C G T A C G T C A
A G C T T C A G T G C A G T A C G T A C G A C T G A C T G A C T T C A G T G C A G T A C G T A C A G T C A G T C A C G T A C G T

PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer

Match Rank:5
Score:0.61
Offset:0
Orientation:forward strand
Alignment:TGTGCTCTGHTCCCCA
TGACCTTTGCCCCA--
 A C G T A T C G G C A T A T C G A G T C A C G T A G T C A C G T A C T G G A T C A G C T A G T C A G T C A G T C G T A C G T C A
C G A T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G G T A C G A T C G T A C G A T C G T C A A C G T A C G T

Pparg::Rxra/MA0065.2/Jaspar

Match Rank:6
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:TGTGCTCTGHTCCCCA
TGACCTTTGCCCTAN-
 A C G T A T C G G C A T A T C G A G T C A C G T A G T C A C G T A C T G G A T C A G C T A G T C A G T C A G T C G T A C G T C A
C G A T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G G T A C G A T C G A T C G A C T T C G A T A G C A C G T

Rxra/MA0512.2/Jaspar

Match Rank:7
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:TGTGCTCTGHTCCCCA
TGACCTTTGACCCC--
 A C G T A T C G G C A T A T C G A G T C A C G T A G T C A C G T A C T G G A T C A G C T A G T C A G T C A G T C G T A C G T C A
A G C T T C A G T G C A T G A C T A G C A G C T G A C T A G C T T C A G T G C A G T A C G T A C A G T C A G T C A C G T A C G T

RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:8
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:TGTGCTCTGHTCCCCA
TGACCTTTGCCCTA--
 A C G T A T C G G C A T A T C G A G T C A C G T A G T C A C G T A C T G G A T C A G C T A G T C A G T C A G T C G T A C G T C A
A G C T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G T G A C G A T C G A T C G A C T T C G A A C G T A C G T

ZNF189(Zf)/HEK293-ZNF189.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:9
Score:0.60
Offset:4
Orientation:reverse strand
Alignment:TGTGCTCTGHTCCCCA
----TKCTGTTCCA--
 A C G T A T C G G C A T A T C G A G T C A C G T A G T C A C G T A C T G G A T C A G C T A G T C A G T C A G T C G T A C G T C A
A C G T A C G T A C G T A C G T A C G T C A G T T A G C A G C T T A C G C G A T A C G T A G T C G T A C G T C A A C G T A C G T

HNF4G/MA0484.1/Jaspar

Match Rank:10
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:TGTGCTCTGHTCCCCA
TGGACTTTGNNCTCN-
 A C G T A T C G G C A T A T C G A G T C A C G T A G T C A C G T A C T G G A T C A G C T A G T C A G T C A G T C G T A C G T C A
C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T T C A G T C A G G T C A G A T C G A C T A G T C G C A T A C G T