Information for 6-CTCTAKCAGG (Motif 36)

A G T C A C G T A G T C A C G T C T G A A C T G A T G C C G T A A C T G A C T G
Reverse Opposite:
A G T C A G T C C G A T A T C G G T A C A G C T C G T A A C T G C G T A A C T G
p-value:1e-6
log p-value:-1.438e+01
Information Content per bp:1.886
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.59%
Number of Background Sequences with motif119.3
Percentage of Background Sequences with motif0.25%
Average Position of motif in Targets49.2 +/- 26.3bp
Average Position of motif in Background48.9 +/- 25.8bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF415(Zf)/HEK293-ZNF415.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--CTCTAKCAGG
GGCTCYAKCAYC
 A C G T A C G T A G T C A C G T A G T C A C G T C T G A A C T G A T G C C G T A A C T G A C T G
C A T G A C T G A G T C A C G T A G T C G A T C C G T A A C T G T A G C C T G A A G C T T A G C

TATA-Box(TBP)/Promoter/Homer

Match Rank:2
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--CTCTAKCAGG
GNCTATAAAAGG
 A C G T A C G T A G T C A C G T A G T C A C G T C T G A A C T G A T G C C G T A A C T G A C T G
A T C G A T C G A T G C A G C T G C T A A C G T C G T A C G T A C T G A C T G A C T A G T A C G

PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer

Match Rank:3
Score:0.55
Offset:-4
Orientation:forward strand
Alignment:----CTCTAKCAGG
AGGTCTCTAACC--
 A C G T A C G T A C G T A C G T A G T C A C G T A G T C A C G T C T G A A C T G A T G C C G T A A C T G A C T G
C T G A T C A G A C T G C A G T A G T C G A C T A G T C A C G T C G T A G C T A A T G C G A T C A C G T A C G T

MF0008.1_MADS_class/Jaspar

Match Rank:4
Score:0.52
Offset:0
Orientation:forward strand
Alignment:CTCTAKCAGG
CCATATATGG
 A G T C A C G T A G T C A C G T C T G A A C T G A T G C C G T A A C T G A C T G
G A T C A G T C G C T A C G A T C G T A C G A T C G T A G C A T C T A G C A T G

SNAI2/MA0745.1/Jaspar

Match Rank:5
Score:0.51
Offset:4
Orientation:forward strand
Alignment:CTCTAKCAGG---
----AACAGGTGT
 A G T C A C G T A G T C A C G T C T G A A C T G A T G C C G T A A C T G A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C T G A C T G A G T A C G C T A C T A G C T A G G A C T C A T G A G C T

CArG(MADS)/PUER-Srf-ChIP-Seq(Sullivan_et_al.)/Homer

Match Rank:6
Score:0.50
Offset:0
Orientation:forward strand
Alignment:CTCTAKCAGG--
CCATATATGGNA
 A G T C A C G T A G T C A C G T C T G A A C T G A T G C C G T A A C T G A C T G A C G T A C G T
A T G C A G T C G C T A C G A T C G T A G C A T G C T A C G A T C T A G C A T G T G A C G T C A

SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer

Match Rank:7
Score:0.50
Offset:4
Orientation:reverse strand
Alignment:CTCTAKCAGG----
----ANCAGGATGT
 A G T C A C G T A G T C A C G T C T G A A C T G A T G C C G T A A C T G A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C G T A T A G C G T A C G T C A A C T G A C T G C G T A C G A T T A C G A G C T

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:8
Score:0.49
Offset:-2
Orientation:reverse strand
Alignment:--CTCTAKCAGG--------
GCCASCAGGGGGCGCYVNNG
 A C G T A C G T A G T C A C G T A G T C A C G T C T G A A C T G A T G C C G T A A C T G A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C T A G T A G C A G T C C G T A T A G C G A T C C G T A A C T G C T A G C A T G A C T G A C T G G T A C C T A G A T G C G A T C T C A G A C T G T C A G A T C G

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:9
Score:0.49
Offset:3
Orientation:reverse strand
Alignment:CTCTAKCAGG-----
---SDGCAGGTGCNS
 A G T C A C G T A G T C A C G T C T G A A C T G A T G C C G T A A C T G A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A T C G C T A G C T A G A G T C C G T A A C T G A C T G A C G T A C T G A T G C G A T C A T G C

SA0001.1_at_AC_acceptor/Jaspar

Match Rank:10
Score:0.49
Offset:-8
Orientation:forward strand
Alignment:--------CTCTAKCAGG--
TTTTTTTTTTTTTTCAGGTT
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C G T A G T C A C G T C T G A A C T G A T G C C G T A A C T G A C T G A C G T A C G T
G A C T G A C T A G C T A G C T A G C T A G C T A G C T A G C T A G C T G A C T G A C T G A C T G A C T G A C T G A T C C G T A A C T G T C A G C G A T C G A T