Information for 5-AGCAAAGAGG (Motif 35)

C G T A A C T G A G T C C T G A G T C A G T C A A C T G C G T A A C T G A T C G
Reverse Opposite:
A T G C A G T C C G A T A G T C A C G T A C G T A G C T A C T G A G T C A C G T
p-value:1e-6
log p-value:-1.600e+01
Information Content per bp:1.869
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif1.85%
Number of Background Sequences with motif145.2
Percentage of Background Sequences with motif0.30%
Average Position of motif in Targets48.6 +/- 27.7bp
Average Position of motif in Background50.3 +/- 27.4bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0056.1_Rfxdc2_1/Jaspar

Match Rank:1
Score:0.62
Offset:-6
Orientation:forward strand
Alignment:------AGCAAAGAGG
CCGCATAGCAACGGA-
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C T G A G T C C T G A G T C A G T C A A C T G C G T A A C T G A T C G
A G T C A G T C T A C G A T G C G C T A G A C T T C G A C T A G G A T C C T G A T C G A A G T C T A C G T C A G C T G A A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:2
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-AGCAAAGAGG
CAGCC------
 A C G T C G T A A C T G A G T C C T G A G T C A G T C A A C T G C G T A A C T G A T C G
T A G C C G T A A C T G A G T C A T G C A C G T A C G T A C G T A C G T A C G T A C G T

PB0071.1_Sox4_1/Jaspar

Match Rank:3
Score:0.58
Offset:-5
Orientation:forward strand
Alignment:-----AGCAAAGAGG--
AGAAGAACAAAGGACTA
 A C G T A C G T A C G T A C G T A C G T C G T A A C T G A G T C C T G A G T C A G T C A A C T G C G T A A C T G A T C G A C G T A C G T
G T C A A C T G C T G A C G T A C T A G T C G A C G T A A G T C C G T A C G T A C G T A C T A G T C A G T C G A A G T C G C A T G C T A

PB0084.1_Tcf7l2_1/Jaspar

Match Rank:4
Score:0.58
Offset:-5
Orientation:reverse strand
Alignment:-----AGCAAAGAGG--
NNNAGATCAAAGGANNN
 A C G T A C G T A C G T A C G T A C G T C G T A A C T G A G T C C T G A G T C A G T C A A C T G C G T A A C T G A T C G A C G T A C G T
A C G T G C T A G C A T C G T A A T C G C G T A C G A T T A G C C G T A C G T A C G T A T C A G T C A G T C G A G T C A G C T A G C A T

PB0040.1_Lef1_1/Jaspar

Match Rank:5
Score:0.58
Offset:-5
Orientation:reverse strand
Alignment:-----AGCAAAGAGG--
NANAGATCAAAGGGNNN
 A C G T A C G T A C G T A C G T A C G T C G T A A C T G A G T C C T G A G T C A G T C A A C T G C G T A A C T G A T C G A C G T A C G T
A C T G G C T A G C A T C G T A A T C G C G T A C G A T T A G C C G T A C G T A C G T A T C A G T C A G T C A G G C T A G A C T G A C T

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:6
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--AGCAAAGAGG
GGAACAAAGR--
 A C G T A C G T C G T A A C T G A G T C C T G A G T C A G T C A A C T G C G T A A C T G A T C G
T C A G T C A G T C G A C G T A A G T C C G T A C G T A C G T A A C T G T C A G A C G T A C G T

PB0055.1_Rfx4_1/Jaspar

Match Rank:7
Score:0.57
Offset:-6
Orientation:forward strand
Alignment:------AGCAAAGAGG
TACCATAGCAACGGT-
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C T G A G T C C T G A G T C A G T C A A C T G C G T A A C T G A T C G
A G C T G T C A T A G C A T G C G T C A A G C T T C G A C T A G G A T C C T G A C T G A A G T C T A C G T C A G C G A T A C G T

PB0061.1_Sox11_1/Jaspar

Match Rank:8
Score:0.57
Offset:-5
Orientation:forward strand
Alignment:-----AGCAAAGAGG--
ATAAGAACAAAGGACTA
 A C G T A C G T A C G T A C G T A C G T C G T A A C T G A G T C C T G A G T C A G T C A A C T G C G T A A C T G A T C G A C G T A C G T
G C T A A C G T C G T A C G T A C T A G T C G A C G T A A G T C C G T A G T C A C G T A C T A G T C A G T C G A A G T C G C A T G C T A

Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer

Match Rank:9
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--AGCAAAGAGG
ACATCAAAGGNA
 A C G T A C G T C G T A A C T G A G T C C T G A G T C A G T C A A C T G C G T A A C T G A T C G
C T G A A T G C G C T A G C A T A T G C C G T A T C G A C T G A C T A G T C A G T A C G G T C A

FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer

Match Rank:10
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--AGCAAAGAGG
WAAGTAAAYA--
 A C G T A C G T C G T A A C T G A G T C C T G A G T C A G T C A A C T G C G T A A C T G A T C G
G C A T T C G A C T G A T C A G A G C T G T C A G T C A C T G A A G T C T G C A A C G T A C G T