Information for 19-CACTCAGTCCGGG (Motif 31)

G T A C C G T A A T G C A G C T A T G C T G C A A T C G A G C T A T G C T G A C T C A G T A C G A T C G
Reverse Opposite:
A T G C A T G C A G T C A C T G T A C G T C G A T A G C A C G T A T C G T C G A T A C G G C A T A C T G
p-value:1e-7
log p-value:-1.743e+01
Information Content per bp:1.651
Number of Target Sequences with motif36.0
Percentage of Target Sequences with motif4.77%
Number of Background Sequences with motif799.8
Percentage of Background Sequences with motif1.65%
Average Position of motif in Targets47.8 +/- 26.8bp
Average Position of motif in Background49.7 +/- 28.1bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer

Match Rank:1
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-CACTCAGTCCGGG-
SCAGYCADGCATGAC
 A C G T G T A C C G T A A T G C A G C T A T G C T G C A A T C G A G C T A T G C T G A C T C A G T A C G A T C G A C G T
A T C G G T A C C G T A A T C G A G C T A T G C C G T A C T A G A T C G A G T C T C G A C A G T T C A G T C G A T G A C

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:2
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---CACTCAGTCCGGG
AGCCACTCAAG-----
 A C G T A C G T A C G T G T A C C G T A A T G C A G C T A T G C T G C A A T C G A G C T A T G C T G A C T C A G T A C G A T C G
C T G A C T A G T A G C A G T C G C T A A G T C A C G T A G T C G T C A C T G A T A C G A C G T A C G T A C G T A C G T A C G T

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:3
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---CACTCAGTCCGGG
MRSCACTYAA------
 A C G T A C G T A C G T G T A C C G T A A T G C A G C T A T G C T G C A A T C G A G C T A T G C T G A C T C A G T A C G A T C G
G T C A C T G A T A G C A G T C C G T A G T A C G C A T A G T C C T G A T C G A A C G T A C G T A C G T A C G T A C G T A C G T

Zfx/MA0146.2/Jaspar

Match Rank:4
Score:0.52
Offset:4
Orientation:reverse strand
Alignment:CACTCAGTCCGGG-----
----CAGGCCNNGGCCNN
 G T A C C G T A A T G C A G C T A T G C T G C A A T C G A G C T A T G C T G A C T C A G T A C G A T C G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A T G C C T G A C T A G A C T G T A G C A G T C A C G T T G A C C T A G T A C G G A T C A T G C T A G C T A G C

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:5
Score:0.51
Offset:0
Orientation:reverse strand
Alignment:CACTCAGTCCGGG
CACGCA-------
 G T A C C G T A A T G C A G C T A T G C T G C A A T C G A G C T A T G C T G A C T C A G T A C G A T C G
A G T C C G T A G T A C C T A G G T A C C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:6
Score:0.51
Offset:-3
Orientation:forward strand
Alignment:---CACTCAGTCCGGG
AASCACTCAA------
 A C G T A C G T A C G T G T A C C G T A A T G C A G C T A T G C T G C A A T C G A G C T A T G C T G A C T C A G T A C G A T C G
C T G A C T G A T A G C G A T C G C T A G T A C A C G T G A T C T G C A C G T A A C G T A C G T A C G T A C G T A C G T A C G T

ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:7
Score:0.50
Offset:4
Orientation:forward strand
Alignment:CACTCAGTCCGGG-
----GAGSCCGAGC
 G T A C C G T A A T G C A G C T A T G C T G C A A T C G A G C T A T G C T G A C T C A G T A C G A T C G A C G T
A C G T A C G T A C G T A C G T A C T G C G T A A C T G A T G C T G A C G A T C A T C G T G C A A C T G A G T C

Zfp809(Zf)/ES-Zfp809-ChIP-Seq(GSE70799)/Homer

Match Rank:8
Score:0.50
Offset:1
Orientation:reverse strand
Alignment:CACTCAGTCCGGG---
-TCCCAGMCRAGCCCC
 G T A C C G T A A T G C A G C T A T G C T G C A A T C G A G C T A T G C T G A C T C A G T A C G A T C G A C G T A C G T A C G T
A C G T A G C T A G T C A G T C A G T C C T G A T C A G T G C A G A T C T C G A C G T A A C T G A T G C G T A C G T A C G A T C

Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer

Match Rank:9
Score:0.50
Offset:-3
Orientation:forward strand
Alignment:---CACTCAGTCCGGG
AAGCACTTAA------
 A C G T A C G T A C G T G T A C C G T A A T G C A G C T A T G C T G C A A T C G A G C T A T G C T G A C T C A G T A C G A T C G
T C G A T C G A T A C G G A T C G T C A G T A C C G A T A G C T G T C A T G C A A C G T A C G T A C G T A C G T A C G T A C G T

Egr1(Zf)/K562-Egr1-ChIP-Seq(GSE32465)/Homer

Match Rank:10
Score:0.50
Offset:0
Orientation:reverse strand
Alignment:CACTCAGTCCGGG
CRCCCACGCA---
 G T A C C G T A A T G C A G C T A T G C T G C A A T C G A G C T A T G C T G A C T C A G T A C G A T C G
G A T C C T G A A G T C T G A C A G T C G T C A A G T C C T A G A G T C G T C A A C G T A C G T A C G T