Information for 1-CCCTSTCKCCASAGTG (Motif 3)

A G T C A T G C A G T C A C G T A T G C C G A T A G T C A C T G A T G C G T A C C G T A A T G C C T G A A C T G A C G T T A C G
Reverse Opposite:
A T G C G T C A A G T C G A C T A T C G C G A T A C T G A T C G G T A C T C A G C G T A A T C G C G T A A C T G A T C G C T A G
p-value:1e-12
log p-value:-2.892e+01
Information Content per bp:1.730
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.59%
Number of Background Sequences with motif32.9
Percentage of Background Sequences with motif0.07%
Average Position of motif in Targets43.4 +/- 17.7bp
Average Position of motif in Background49.0 +/- 29.5bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:1
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:CCCTSTCKCCASAGTG
GCCTCAGGGCAT----
 A G T C A T G C A G T C A C G T A T G C C G A T A G T C A C T G A T G C G T A C C G T A A T G C C T G A A C T G A C G T T A C G
A T C G A G T C A G T C A G C T A T G C C T G A C T A G A C T G A T C G G T A C G C T A C G A T A C G T A C G T A C G T A C G T

AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer

Match Rank:2
Score:0.54
Offset:0
Orientation:forward strand
Alignment:CCCTSTCKCCASAGTG
SCCTSAGGSCAW----
 A G T C A T G C A G T C A C G T A T G C C G A T A G T C A C T G A T G C G T A C C G T A A T G C C T G A A C T G A C G T T A C G
A T C G A G T C A G T C G A C T A T G C C T G A C T A G A C T G T A C G G T A C C T G A C G A T A C G T A C G T A C G T A C G T

Srebp2(bHLH)/HepG2-Srebp2-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.54
Offset:0
Orientation:forward strand
Alignment:CCCTSTCKCCASAGTG
CNGTCACGCCAC----
 A G T C A T G C A G T C A C G T A T G C C G A T A G T C A C T G A T G C G T A C C G T A A T G C C T G A A C T G A C G T T A C G
G T A C C T A G T C A G A G C T T A G C C G T A A T G C T A C G A G T C G T A C G T C A A G T C A C G T A C G T A C G T A C G T

Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer

Match Rank:4
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:CCCTSTCKCCASAGTG
-SCTGTCARCACC---
 A G T C A T G C A G T C A C G T A T G C C G A T A G T C A C T G A T G C G T A C C G T A A T G C C T G A A C T G A C G T T A C G
A C G T T A G C G A T C C G A T C A T G G C A T A G T C G T C A C T G A A G T C C T G A T A G C A G T C A C G T A C G T A C G T

CRE(bZIP)/Promoter/Homer

Match Rank:5
Score:0.53
Offset:0
Orientation:forward strand
Alignment:CCCTSTCKCCASAGTG
CGGTGACGTCAC----
 A G T C A T G C A G T C A C G T A T G C C G A T A G T C A C T G A T G C G T A C C G T A A T G C C T G A A C T G A C G T T A C G
A T G C A T C G T A C G A G C T A T C G C T G A A G T C C T A G A G C T A T G C C T G A A T G C A C G T A C G T A C G T A C G T

TFAP2B(var.3)/MA0813.1/Jaspar

Match Rank:6
Score:0.51
Offset:-2
Orientation:forward strand
Alignment:--CCCTSTCKCCASAGTG
TGCCCTGAGGGCA-----
 A C G T A C G T A G T C A T G C A G T C A C G T A T G C C G A T A G T C A C T G A T G C G T A C C G T A A T G C C T G A A C T G A C G T T A C G
G C A T A T C G A G T C A G T C A G T C A G C T A C T G T C G A T C A G A C T G A C T G A T G C C G T A A C G T A C G T A C G T A C G T A C G T

TFAP2A(var.3)/MA0872.1/Jaspar

Match Rank:7
Score:0.51
Offset:-2
Orientation:reverse strand
Alignment:--CCCTSTCKCCASAGTG
TGCCCNNAGGGCA-----
 A C G T A C G T A G T C A T G C A G T C A C G T A T G C C G A T A G T C A C T G A T G C G T A C C G T A A T G C C T G A A C T G A C G T T A C G
G C A T A T C G A G T C A G T C A G T C A G C T T A G C T C G A T C A G A C T G A C T G A T G C C G T A A C G T A C G T A C G T A C G T A C G T

Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer

Match Rank:8
Score:0.51
Offset:1
Orientation:reverse strand
Alignment:CCCTSTCKCCASAGTG--
-NSTGTTTRCWCAGBNNN
 A G T C A T G C A G T C A C G T A T G C C G A T A G T C A C T G A T G C G T A C C G T A A T G C C T G A A C T G A C G T T A C G A C G T A C G T
A C G T G A C T A T G C A C G T C T A G C G A T C A G T C A G T T C G A G A T C G C T A A G T C C G T A T C A G A T G C T A G C G A C T T A C G

TFAP2C(var.3)/MA0815.1/Jaspar

Match Rank:9
Score:0.51
Offset:-2
Orientation:forward strand
Alignment:--CCCTSTCKCCASAGTG
TGCCCTGAGGGCA-----
 A C G T A C G T A G T C A T G C A G T C A C G T A T G C C G A T A G T C A C T G A T G C G T A C C G T A A T G C C T G A A C T G A C G T T A C G
G C A T A T C G A G T C A G T C A G T C A G C T A T C G T C G A T C A G A C T G A C T G A T G C C G T A A C G T A C G T A C G T A C G T A C G T

Srebp1a(bHLH)/HepG2-Srebp1a-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.51
Offset:2
Orientation:forward strand
Alignment:CCCTSTCKCCASAGTG
--ATCACCCCAT----
 A G T C A T G C A G T C A C G T A T G C C G A T A G T C A C T G A T G C G T A C C G T A A T G C C T G A A C T G A C G T T A C G
A C G T A C G T T C G A G C A T A T G C C T G A A T G C T A G C A G T C G T A C T C G A A G C T A C G T A C G T A C G T A C G T