Information for 18-CAGCTCTAGGACA (Motif 29)

A G T C C G T A A C T G A T G C C G A T A G T C C G A T C G T A A C T G A C T G C G T A A G T C C G T A
Reverse Opposite:
A C G T A C T G A C G T A G T C G T A C A C G T C G T A A C T G C G T A A T C G A G T C C G A T A C T G
p-value:1e-7
log p-value:-1.764e+01
Information Content per bp:1.930
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.66%
Number of Background Sequences with motif5.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets41.6 +/- 15.4bp
Average Position of motif in Background62.9 +/- 19.6bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:1
Score:0.67
Offset:1
Orientation:forward strand
Alignment:CAGCTCTAGGACA
-AGGTCAAGGTCA
 A G T C C G T A A C T G A T G C C G A T A G T C C G A T C G T A A C T G A C T G C G T A A G T C C G T A
A C G T T C G A A C T G C A T G A G C T A G T C C G T A C T G A C T A G A C T G C G A T A T G C C T G A

RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer

Match Rank:2
Score:0.66
Offset:1
Orientation:forward strand
Alignment:CAGCTCTAGGACA
-AGGTCAAGGTCA
 A G T C C G T A A C T G A T G C C G A T A G T C C G A T C G T A A C T G A C T G C G T A A G T C C G T A
A C G T C T G A C T A G A C T G G C A T A T G C C G T A C T G A C T A G A C T G A C G T A G T C C T G A

Nr5a2/MA0505.1/Jaspar

Match Rank:3
Score:0.65
Offset:0
Orientation:forward strand
Alignment:CAGCTCTAGGACA--
AAGTTCAAGGTCAGC
 A G T C C G T A A C T G A T G C C G A T A G T C C G A T C G T A A C T G A C T G C G T A A G T C C G T A A C G T A C G T
T C G A C T G A C T A G A G C T G A C T T A G C G T C A C T G A C T A G A C T G G A C T A G T C C G T A A C T G A T G C

ZBTB12(Zf)/HEK293-ZBTB12.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:4
Score:0.63
Offset:1
Orientation:forward strand
Alignment:CAGCTCTAGGACA---
-NGNTCTAGAACCNGV
 A G T C C G T A A C T G A T G C C G A T A G T C C G A T C G T A A C T G A C T G C G T A A G T C C G T A A C G T A C G T A C G T
A C G T C T G A T C A G G C T A A G C T A G T C G A C T C T G A C T A G T G C A C T G A A G T C G T A C G A T C A C T G T C G A

ZNF415(Zf)/HEK293-ZNF415.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:5
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:CAGCTCTAGGACA
-GGCTCYAKCAYC
 A G T C C G T A A C T G A T G C C G A T A G T C C G A T C G T A A C T G A C T G C G T A A G T C C G T A
A C G T C A T G A C T G A G T C A C G T A G T C G A T C C G T A A C T G T A G C C T G A A G C T T A G C

PB0090.1_Zbtb12_1/Jaspar

Match Rank:6
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:CAGCTCTAGGACA----
NNGATCTAGAACCTNNN
 A G T C C G T A A C T G A T G C C G A T A G T C C G A T C G T A A C T G A C T G C G T A A G T C C G T A A C G T A C G T A C G T A C G T
T C A G A C G T C T A G C G T A A G C T A G T C A C G T C T G A A C T G G C T A C G T A A G T C T G A C A G C T C G A T G T C A T A C G

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:7
Score:0.59
Offset:3
Orientation:forward strand
Alignment:CAGCTCTAGGACA
---NTCAAGGTCA
 A G T C C G T A A C T G A T G C C G A T A G T C C G A T C G T A A C T G A C T G C G T A A G T C C G T A
A C G T A C G T A C G T A C G T G A C T A T G C G C T A C T G A C T A G A C T G G A C T A G T C C G T A

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:8
Score:0.59
Offset:3
Orientation:forward strand
Alignment:CAGCTCTAGGACA
---BTCAAGGTCA
 A G T C C G T A A C T G A T G C C G A T A G T C C G A T C G T A A C T G A C T G C G T A A G T C C G T A
A C G T A C G T A C G T A C G T G A C T T A G C C G T A C T G A C A T G C T A G G A C T G A T C C G T A

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:9
Score:0.58
Offset:5
Orientation:forward strand
Alignment:CAGCTCTAGGACA--
-----CAAGGHCANV
 A G T C C G T A A C T G A T G C C G A T A G T C C G A T C G T A A C T G A C T G C G T A A G T C C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T G A C C G T A C T G A A C T G A C T G G A C T G A T C T G C A G T A C T A C G

ESRRB/MA0141.3/Jaspar

Match Rank:10
Score:0.56
Offset:4
Orientation:forward strand
Alignment:CAGCTCTAGGACA--
----TCAAGGTCATA
 A G T C C G T A A C T G A T G C C G A T A G T C C G A T C G T A A C T G A C T G C G T A A G T C C G T A A C G T A C G T
A C G T A C G T A C G T A C G T G A C T T A G C G C T A T C G A T C A G A T C G A G C T G A T C C T G A G C A T G C T A