Information for 10-GTCACTKGGRGSW (Motif 20)

A C T G A C G T A G T C G T C A A G T C A G C T A C G T A C T G A C T G C T G A A C T G A T G C C G T A
Reverse Opposite:
C G A T A T C G A G T C A G C T A G T C A G T C G T C A C T G A C T A G A C G T A C T G C G T A A G T C
p-value:1e-8
log p-value:-2.001e+01
Information Content per bp:1.871
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.79%
Number of Background Sequences with motif7.9
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets51.8 +/- 21.8bp
Average Position of motif in Background53.9 +/- 36.5bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

USF1/MA0093.2/Jaspar

Match Rank:1
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-GTCACTKGGRGSW
GGTCACGTGGC---
 A C G T A C T G A C G T A G T C G T C A A G T C A G C T A C G T A C T G A C T G C T G A A C T G A T G C C G T A
C T A G C T A G G A C T A G T C C G T A A G T C T C A G C G A T A C T G T C A G A G T C A C G T A C G T A C G T

PB0195.1_Zbtb3_2/Jaspar

Match Rank:2
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--GTCACTKGGRGSW-
CAATCACTGGCAGAAT
 A C G T A C G T A C T G A C G T A G T C G T C A A G T C A G C T A C G T A C T G A C T G C T G A A C T G A T G C C G T A A C G T
A G T C G C T A T C G A G C A T G T A C C T G A T G A C C G A T A C T G A C T G A G T C C T G A C T A G G C T A C G T A C G A T

NPAS2(bHLH)/Liver-NPAS2-ChIP-Seq(GSE39860)/Homer

Match Rank:3
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:GTCACTKGGRGSW
GTCACGTGGM---
 A C T G A C G T A G T C G T C A A G T C A G C T A C G T A C T G A C T G C T G A A C T G A T G C C G T A
T C A G C A G T A G T C C G T A A T G C T C A G G C A T A C T G A C T G T G A C A C G T A C G T A C G T

Pax2/MA0067.1/Jaspar

Match Rank:4
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-GTCACTKGGRGSW
AGTCACGC------
 A C G T A C T G A C G T A G T C G T C A A G T C A G C T A C G T A C T G A C T G C T G A A C T G A T G C C G T A
G C T A C T A G G C A T A G T C C T G A G A T C C A T G A T C G A C G T A C G T A C G T A C G T A C G T A C G T

USF2/MA0526.1/Jaspar

Match Rank:5
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-GTCACTKGGRGSW
GGTCACATGAC---
 A C G T A C T G A C G T A G T C G T C A A G T C A G C T A C G T A C T G A C T G C T G A A C T G A T G C C G T A
C T A G T C A G A G C T A G T C C G T A A G T C T C G A A C G T A C T G T C G A A G T C A C G T A C G T A C G T

Mitf/MA0620.1/Jaspar

Match Rank:6
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-GTCACTKGGRGSW
GGTCACGTGG----
 A C G T A C T G A C G T A G T C G T C A A G T C A G C T A C G T A C T G A C T G C T G A A C T G A T G C C G T A
C T A G T C A G A C G T T G A C G T C A A G T C T C A G G C A T A C T G T C A G A C G T A C G T A C G T A C G T

MITF(bHLH)/MastCells-MITF-ChIP-Seq(GSE48085)/Homer

Match Rank:7
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:GTCACTKGGRGSW
GTCACATGAY---
 A C T G A C G T A G T C G T C A A G T C A G C T A C G T A C T G A C T G C T G A A C T G A T G C C G T A
T C A G G A C T G T A C G T C A A G T C T C G A G C A T A T C G T C G A A G T C A C G T A C G T A C G T

Usf2(bHLH)/C2C12-Usf2-ChIP-Seq(GSE36030)/Homer

Match Rank:8
Score:0.62
Offset:0
Orientation:forward strand
Alignment:GTCACTKGGRGSW
GTCACGTGGT---
 A C T G A C G T A G T C G T C A A G T C A G C T A C G T A C T G A C T G C T G A A C T G A T G C C G T A
T C A G A C G T A G T C T C G A A G T C T C A G G C A T C T A G C T A G A G C T A C G T A C G T A C G T

E-box(bHLH)/Promoter/Homer

Match Rank:9
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---GTCACTKGGRGSW
CCGGTCACGTGA----
 A C G T A C G T A C G T A C T G A C G T A G T C G T C A A G T C A G C T A C G T A C T G A C T G C T G A A C T G A T G C C G T A
A T G C A T G C A T C G T A C G A G C T A G T C G C T A A G T C T C A G G A C T A C T G T C G A A C G T A C G T A C G T A C G T

Arntl/MA0603.1/Jaspar

Match Rank:10
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-GTCACTKGGRGSW
GGTCACGTGC----
 A C G T A C T G A C G T A G T C G T C A A G T C A G C T A C G T A C T G A C T G C T G A A C T G A T G C C G T A
C A T G T C A G C A G T G T A C G C T A A G T C C T A G G A C T C A T G G A T C A C G T A C G T A C G T A C G T