Motif 2

Information for 2-CCTCACANCACCT (Motif 2)

Reverse Opposite:

p-value:	1e-16
log p-value:	-3.772e+01
Information Content per bp:	1.851
Number of Target Sequences with motif	7.0
Percentage of Target Sequences with motif	0.93%
Number of Background Sequences with motif	2.0
Percentage of Background Sequences with motif	0.00%
Average Position of motif in Targets	48.3 +/- 24.4bp
Average Position of motif in Background	36.0 +/- 17.8bp
Strand Bias (log2 ratio + to - strand density)	-0.4
Multiplicity (# of sites on avg that occur together)	1.00
Motif File:	file (matrix) reverse opposite
SVG Files for Logos:	forward logo reverse opposite

Matches to Known Motifs

Srebp1a(bHLH)/HepG2-Srebp1a-ChIP-Seq(GSE31477)/Homer

Match Rank:	1
Score:	0.65
Offset:	1
Orientation:	forward strand
Alignment:	CCTCACANCACCT -ATCACCCCAT--

SREBF1/MA0595.1/Jaspar

Match Rank:	2
Score:	0.65
Offset:	1
Orientation:	forward strand
Alignment:	CCTCACANCACCT -ATCACCCCAC--

MGA/MA0801.1/Jaspar

Match Rank:	3
Score:	0.64
Offset:	2
Orientation:	reverse strand
Alignment:	CCTCACANCACCT --TCACACCT---

TBX1/MA0805.1/Jaspar

Match Rank:	4
Score:	0.63
Offset:	2
Orientation:	reverse strand
Alignment:	CCTCACANCACCT --TCACACCT---

TBX15/MA0803.1/Jaspar

Match Rank:	5
Score:	0.63
Offset:	2
Orientation:	reverse strand
Alignment:	CCTCACANCACCT --TCACACCT---

Srebp2(bHLH)/HepG2-Srebp2-ChIP-Seq(GSE31477)/Homer

Match Rank:	6
Score:	0.62
Offset:	-1
Orientation:	forward strand
Alignment:	-CCTCACANCACCT CNGTCACGCCAC--

TBX20/MA0689.1/Jaspar

Match Rank:	7
Score:	0.62
Offset:	0
Orientation:	reverse strand
Alignment:	CCTCACANCACCT CTTCACACCTA--

SREBF2/MA0596.1/Jaspar

Match Rank:	8
Score:	0.62
Offset:	1
Orientation:	reverse strand
Alignment:	CCTCACANCACCT -ATCACCCCAT--

Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer

Match Rank:	9
Score:	0.61
Offset:	0
Orientation:	reverse strand
Alignment:	CCTCACANCACCT SCTGTCARCACC-

TBX4/MA0806.1/Jaspar

Match Rank:	10
Score:	0.59
Offset:	2
Orientation:	reverse strand
Alignment:	CCTCACANCACCT --TCACACCT---