p-value: | 1e-8 |
log p-value: | -2.017e+01 |
Information Content per bp: | 1.776 |
Number of Target Sequences with motif | 5.0 |
Percentage of Target Sequences with motif | 0.66% |
Number of Background Sequences with motif | 3.3 |
Percentage of Background Sequences with motif | 0.01% |
Average Position of motif in Targets | 53.6 +/- 26.6bp |
Average Position of motif in Background | 25.7 +/- 13.7bp |
Strand Bias (log2 ratio + to - strand density) | -0.6 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
RXRA::VDR/MA0074.1/Jaspar
Match Rank: | 1 |
Score: | 0.55 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | GAAGCCTGGAGTTCAG GGGTCAACGAGTTCA- |
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POL008.1_DCE_S_I/Jaspar
Match Rank: | 2 |
Score: | 0.54 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -GAAGCCTGGAGTTCAG NGAAGC----------- |
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Nr2e3/MA0164.1/Jaspar
Match Rank: | 3 |
Score: | 0.52 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | GAAGCCTGGAGTTCAG -AAGCTTG-------- |
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Vdr/MA0693.1/Jaspar
Match Rank: | 4 |
Score: | 0.51 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -GAAGCCTGGAGTTCAG GAGTTCATTGAGTTCA- |
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TFAP2A/MA0003.3/Jaspar
Match Rank: | 5 |
Score: | 0.51 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | GAAGCCTGGAGTTCAG --NGCCTGAGGCN--- |
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TFAP2B(var.2)/MA0812.1/Jaspar
Match Rank: | 6 |
Score: | 0.51 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | GAAGCCTGGAGTTCAG --TGCCTGAGGCN--- |
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TFAP2C(var.2)/MA0814.1/Jaspar
Match Rank: | 7 |
Score: | 0.50 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | GAAGCCTGGAGTTCAG --NGCCTNAGGCN--- |
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ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer
Match Rank: | 8 |
Score: | 0.49 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | GAAGCCTGGAGTTCAG -AGGCCTNG------- |
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VDR(NR),DR3/GM10855-VDR+vitD-ChIP-Seq(GSE22484)/Homer
Match Rank: | 9 |
Score: | 0.48 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --GAAGCCTGGAGTTCAG-- NGAGGTCANNGAGTTCANNN |
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MF0004.1_Nuclear_Receptor_class/Jaspar
Match Rank: | 10 |
Score: | 0.48 |
Offset: | 9 |
Orientation: | forward strand |
Alignment: | GAAGCCTGGAGTTCAG ---------AGGTCA- |
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