Information for 10-GAAGGGATCGGCAGVC (Motif 16)

A C T G C T G A G T C A A C T G C T A G A T C G G T C A A C G T A G T C C T A G A C T G A G T C C G T A A C T G T C G A G T A C
Reverse Opposite:
A C T G A C G T G T A C C G A T A C T G T G A C A G T C A C T G C G T A A C G T A T G C A G T C A G T C A C G T A G C T A G T C
p-value:1e-9
log p-value:-2.219e+01
Information Content per bp:1.772
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.66%
Number of Background Sequences with motif2.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets73.2 +/- 14.0bp
Average Position of motif in Background60.2 +/- 18.8bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0139.1_Pitx3/Jaspar

Match Rank:1
Score:0.51
Offset:0
Orientation:forward strand
Alignment:GAAGGGATCGGCAGVC
AGGGGGATTAGCTGCC
 A C T G C T G A G T C A A C T G C T A G A T C G G T C A A C G T A G T C C T A G A C T G A G T C C G T A A C T G T C G A G T A C
T C G A C T A G T A C G C T A G C T A G A C T G G T C A A G C T G A C T C G T A C A T G A T G C A C G T C T A G A T G C A T G C

BATF3/MA0835.1/Jaspar

Match Rank:2
Score:0.51
Offset:-1
Orientation:reverse strand
Alignment:-GAAGGGATCGGCAGVC
TGATGACGTCATCA---
 A C G T A C T G C T G A G T C A A C T G C T A G A T C G G T C A A C G T A G T C C T A G A C T G A G T C C G T A A C T G T C G A G T A C
G A C T C A T G T C G A C G A T C A T G G T C A A G T C A C T G A C G T A G T C C G T A A G C T G A T C C T G A A C G T A C G T A C G T

ZNF669(Zf)/HEK293-ZNF669.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:3
Score:0.50
Offset:1
Orientation:forward strand
Alignment:GAAGGGATCGGCAGVC
-GARTGGTCATCGCCC
 A C T G C T G A G T C A A C T G C T A G A T C G G T C A A C G T A G T C C T A G A C T G A G T C C G T A A C T G T C G A G T A C
A C G T T A C G C G T A T C A G G A C T C T A G A C T G C A G T T A G C T C G A A C G T G T A C C T A G A G T C A G T C G A T C

POL008.1_DCE_S_I/Jaspar

Match Rank:4
Score:0.49
Offset:-1
Orientation:reverse strand
Alignment:-GAAGGGATCGGCAGVC
NGAAGC-----------
 A C G T A C T G C T G A G T C A A C T G C T A G A T C G G T C A A C G T A G T C C T A G A C T G A G T C C G T A A C T G T C G A G T A C
T A C G T A C G T G C A T C G A T A C G T G A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:5
Score:0.49
Offset:5
Orientation:reverse strand
Alignment:GAAGGGATCGGCAGVC
-----DCTCAGCAGG-
 A C T G C T G A G T C A A C T G C T A G A T C G G T C A A C G T A G T C C T A G A C T G A G T C C G T A A C T G T C G A G T A C
A C G T A C G T A C G T A C G T A C G T C A G T G T A C G C A T A G T C G C T A A C T G A G T C C T G A A C T G A C T G A C G T

NRL/MA0842.1/Jaspar

Match Rank:6
Score:0.48
Offset:6
Orientation:reverse strand
Alignment:GAAGGGATCGGCAGVC-
------GTCAGCANNTN
 A C T G C T G A G T C A A C T G C T A G A T C G G T C A A C G T A G T C C T A G A C T G A G T C C G T A A C T G T C G A G T A C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T C A G C G A T G T A C C G T A C A T G A G T C C T G A C G T A C G T A G C A T G C A T

PB0126.1_Gata5_2/Jaspar

Match Rank:7
Score:0.47
Offset:-3
Orientation:forward strand
Alignment:---GAAGGGATCGGCAGVC
GACAGAGATATCAGTGT--
 A C G T A C G T A C G T A C T G C T G A G T C A A C T G C T A G A T C G G T C A A C G T A G T C C T A G A C T G A G T C C G T A A C T G T C G A G T A C
T C A G T G C A A G T C G T C A C T A G G T C A C A T G T C G A C A G T G T C A C A G T G A T C C G T A C T A G G A C T A C G T A C G T A C G T A C G T

PB0118.1_Esrra_2/Jaspar

Match Rank:8
Score:0.47
Offset:-2
Orientation:forward strand
Alignment:--GAAGGGATCGGCAGVC
GGCGAGGGGTCAAGGGC-
 A C G T A C G T A C T G C T G A G T C A A C T G C T A G A T C G G T C A A C G T A G T C C T A G A C T G A G T C C G T A A C T G T C G A G T A C
T A C G C A T G A T G C A C T G G C T A T A C G T C A G C A T G A C T G C G A T A G T C C T G A G C T A C T A G A T C G A T C G G T A C A C G T

PB0030.1_Hnf4a_1/Jaspar

Match Rank:9
Score:0.47
Offset:-2
Orientation:forward strand
Alignment:--GAAGGGATCGGCAGVC
CTCCAGGGGTCAATTGA-
 A C G T A C G T A C T G C T G A G T C A A C T G C T A G A T C G G T C A A C G T A G T C C T A G A C T G A G T C C G T A A C T G T C G A G T A C
A T G C C A G T A G C T T G A C G T C A T C A G C T A G A C T G A C T G A C G T A G T C T G C A G T C A A G C T G C A T C A T G T G C A A C G T

ETS:E-box(ETS,bHLH)/HPC7-Scl-ChIP-Seq(GSE22178)/Homer

Match Rank:10
Score:0.46
Offset:2
Orientation:forward strand
Alignment:GAAGGGATCGGCAGVC
--AGGAAACAGCTG--
 A C T G C T G A G T C A A C T G C T A G A T C G G T C A A C G T A G T C C T A G A C T G A G T C C G T A A C T G T C G A G T A C
A C G T A C G T T C G A A C T G A C T G C G T A C G T A T C G A A G T C C T G A A T C G G T A C G C A T C A T G A C G T A C G T