Information for 6-CTKTTAATGATGAATK (Motif 7)

T A G C C G A T A C G T A C G T C G A T C T G A C G T A A C G T C T A G G T C A A C G T A C T G C G T A C G T A C G A T A C G T
Reverse Opposite:
G T C A C G T A A C G T A C G T A G T C G T C A A C G T A G T C C G T A C G A T A G C T C G T A C G T A G T C A C G T A A T C G
p-value:1e-11
log p-value:-2.596e+01
Information Content per bp:1.775
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif1.18%
Number of Background Sequences with motif2.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets65.0 +/- 20.2bp
Average Position of motif in Background46.8 +/- 19.5bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0176.1_Sox5_2/Jaspar

Match Rank:1
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:CTKTTAATGATGAATK
NNCTNAATTATGANN-
 T A G C C G A T A C G T A C G T C G A T C T G A C G T A A C G T C T A G G T C A A C G T A C T G C G T A C G T A C G A T A C G T
G A C T G A T C A T G C A C G T G C A T C T G A C G T A C G A T A C G T G T C A G A C T T C A G G C T A C G A T G C T A A C G T

HNF1A/MA0046.2/Jaspar

Match Rank:2
Score:0.68
Offset:1
Orientation:reverse strand
Alignment:CTKTTAATGATGAATK
-NGTTAATNATTAACN
 T A G C C G A T A C G T A C G T C G A T C T G A C G T A A C G T C T A G G T C A A C G T A C T G C G T A C G T A C G A T A C G T
A C G T C G T A C A T G A G C T G C A T C T G A G T C A G C A T A T G C C G T A C A G T G A C T C G T A T C G A G A T C G A C T

HNF1B/MA0153.2/Jaspar

Match Rank:3
Score:0.68
Offset:2
Orientation:forward strand
Alignment:CTKTTAATGATGAATK
--GTTAATGATTAAC-
 T A G C C G A T A C G T A C G T C G A T C T G A C G T A A C G T C T A G G T C A A C G T A C T G C G T A C G T A C G A T A C G T
A C G T A C G T C A T G A G C T G C A T C T G A G T C A G C A T T A C G C G T A C A G T G A C T C T G A T C G A G A T C A C G T

HNF1b(Homeobox)/PDAC-HNF1B-ChIP-Seq(GSE64557)/Homer

Match Rank:4
Score:0.66
Offset:2
Orientation:forward strand
Alignment:CTKTTAATGATGAATK
--GTTAATNATTAA--
 T A G C C G A T A C G T A C G T C G A T C T G A C G T A A C G T C T A G G T C A A C G T A C T G C G T A C G T A C G A T A C G T
A C G T A C G T C T A G A C G T G C A T T C G A G T C A G C A T A T C G C G T A C A G T A G C T C T G A T G C A A C G T A C G T

HOXA2(Homeobox)/mES-Hoxa2-ChIP-Seq(Donaldson_et_al.)/Homer

Match Rank:5
Score:0.65
Offset:6
Orientation:reverse strand
Alignment:CTKTTAATGATGAATK--
------ATGATKGATGRC
 T A G C C G A T A C G T A C G T C G A T C T G A C G T A A C G T C T A G G T C A A C G T A C T G C G T A C G T A C G A T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C T G A C G A T A T C G C G T A C G A T C A G T C T A G C G T A C G A T A C T G C T G A A T G C

PH0134.1_Pbx1/Jaspar

Match Rank:6
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:CTKTTAATGATGAATK-
NNNNNATTGATGNGTGN
 T A G C C G A T A C G T A C G T C G A T C T G A C G T A A C G T C T A G G T C A A C G T A C T G C G T A C G T A C G A T A C G T A C G T
A C G T A C T G G C A T C G A T C A G T G C T A C G A T A C G T A C T G C G T A G A C T A C T G C A T G C T A G G C A T T C A G C T G A

Pit1+1bp(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:7
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:CTKTTAATGATGAATK
---TGAATTATGCAT-
 T A G C C G A T A C G T A C G T C G A T C T G A C G T A A C G T C T A G G T C A A C G T A C T G C G T A C G T A C G A T A C G T
A C G T A C G T A C G T C G A T C T A G G T C A G C T A C G A T G C A T G C T A C G A T C A T G G A T C G C T A C G A T A C G T

Hnf1(Homeobox)/Liver-Foxa2-Chip-Seq(GSE25694)/Homer

Match Rank:8
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:CTKTTAATGATGAATK
---TTAATGTTTAACC
 T A G C C G A T A C G T A C G T C G A T C T G A C G T A A C G T C T A G G T C A A C G T A C T G C G T A C G T A C G A T A C G T
A C G T A C G T A C G T A C G T G C A T C T G A G T C A G C A T T A C G C G A T C A G T G A C T G C T A C G T A G A T C G A T C

POU4F1/MA0790.1/Jaspar

Match Rank:9
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:CTKTTAATGATGAATK
-CATTAATTATTCAT-
 T A G C C G A T A C G T A C G T C G A T C T G A C G T A A C G T C T A G G T C A A C G T A C T G C G T A C G T A C G A T A C G T
A C G T G T A C C T G A A G C T G C A T G C T A G C T A G C A T G C A T C G T A C G A T C A G T G A T C C T G A A G C T A C G T

Hoxb4(Homeobox)/ES-Hoxb4-ChIP-Seq(GSE34014)/Homer

Match Rank:10
Score:0.61
Offset:7
Orientation:forward strand
Alignment:CTKTTAATGATGAATK---
-------TGATTRATGGCY
 T A G C C G A T A C G T A C G T C G A T C T G A C G T A A C G T C T A G G T C A A C G T A C T G C G T A C G T A C G A T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G A T C T A G T C G A A G C T C G A T C T G A C G T A A G C T A C T G C T A G A T G C G A T C