Information for 3-ACTGTGCCCA (Motif 9)

T G C A T A G C G A C T T C A G C G A T C T A G A G T C G T A C G T A C G T C A
Reverse Opposite:
C A G T C A T G C A T G T C A G G A T C G C T A A G T C C T G A A T C G A C G T
p-value:1e-7
log p-value:-1.724e+01
Information Content per bp:1.672
Number of Target Sequences with motif32.0
Percentage of Target Sequences with motif25.60%
Number of Background Sequences with motif4234.5
Percentage of Background Sequences with motif8.87%
Average Position of motif in Targets52.0 +/- 24.6bp
Average Position of motif in Background49.9 +/- 34.1bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0133.1_Hic1_2/Jaspar

Match Rank:1
Score:0.77
Offset:-1
Orientation:forward strand
Alignment:-ACTGTGCCCA-----
GGGTGTGCCCAAAAGG
 A C G T T G C A T A G C G A C T T C A G C G A T C T A G A G T C G T A C G T A C G T C A A C G T A C G T A C G T A C G T A C G T
C A T G A T C G C A T G C A G T C T A G A C G T C T A G A G T C A G T C G T A C G T C A C G T A C G T A G T C A C T A G T A C G

HIC2/MA0738.1/Jaspar

Match Rank:2
Score:0.76
Offset:3
Orientation:forward strand
Alignment:ACTGTGCCCA--
---ATGCCCACC
 T G C A T A G C G A C T T C A G C G A T C T A G A G T C G T A C G T A C G T C A A C G T A C G T
A C G T A C G T A C G T T C G A A G C T T C A G T G A C G T A C G T A C T C G A T A G C A G T C

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:3
Score:0.69
Offset:4
Orientation:reverse strand
Alignment:ACTGTGCCCA----
----TGCCCAGNHW
 T G C A T A G C G A C T T C A G C G A T C T A G A G T C G T A C G T A C G T C A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C G A T C A T G A G T C G A T C G T A C G C T A C T A G C A T G G A T C C G T A

PB0104.1_Zscan4_1/Jaspar

Match Rank:4
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--ACTGTGCCCA-----
TACATGTGCACATAAAA
 A C G T A C G T T G C A T A G C G A C T T C A G C G A T C T A G A G T C G T A C G T A C G T C A A C G T A C G T A C G T A C G T A C G T
C A G T G T C A T G A C C T G A C G A T T C A G A G C T C T A G A G T C C T G A A G T C G C T A A G C T G C T A G C T A C G T A G T C A

PB0026.1_Gm397_1/Jaspar

Match Rank:5
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--ACTGTGCCCA-----
CAGATGTGCACATACGT
 A C G T A C G T T G C A T A G C G A C T T C A G C G A T C T A G A G T C G T A C G T A C G T C A A C G T A C G T A C G T A C G T A C G T
G T A C G C T A C A T G C G T A C G A T T A C G A G C T C T A G A G T C C T G A A T G C G C T A A G C T G T C A G T A C C A T G G A C T

PB0099.1_Zfp691_1/Jaspar

Match Rank:6
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---ACTGTGCCCA----
CGAACAGTGCTCACTAT
 A C G T A C G T A C G T T G C A T A G C G A C T T C A G C G A T C T A G A G T C G T A C G T A C G T C A A C G T A C G T A C G T A C G T
A G T C C A T G G C T A T C G A G A T C T C G A A C T G C G A T C T A G G T A C A G C T A G T C T G C A A G T C G C A T C T G A C G A T

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:7
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:ACTGTGCCCA-
-CTGTTCCTGG
 T G C A T A G C G A C T T C A G C G A T C T A G A G T C G T A C G T A C G T C A A C G T
A C G T T A G C C G A T A T C G A C G T A C G T A G T C A G T C G C A T C A T G A T C G

POL009.1_DCE_S_II/Jaspar

Match Rank:8
Score:0.63
Offset:0
Orientation:forward strand
Alignment:ACTGTGCCCA
GCTGTG----
 T G C A T A G C G A C T T C A G C G A T C T A G A G T C G T A C G T A C G T C A
T A C G T A G C C A G T A T C G G A C T A T C G A C G T A C G T A C G T A C G T

THAP1/MA0597.1/Jaspar

Match Rank:9
Score:0.63
Offset:3
Orientation:forward strand
Alignment:ACTGTGCCCA--
---CTGCCCGCA
 T G C A T A G C G A C T T C A G C G A T C T A G A G T C G T A C G T A C G T C A A C G T A C G T
A C G T A C G T A C G T A G T C G A C T C A T G G A T C G T A C G T A C C A T G A G T C G T C A

Hic1/MA0739.1/Jaspar

Match Rank:10
Score:0.60
Offset:3
Orientation:forward strand
Alignment:ACTGTGCCCA--
---ATGCCAACC
 T G C A T A G C G A C T T C A G C G A T C T A G A G T C G T A C G T A C G T C A A C G T A C G T
A C G T A C G T A C G T T C G A A G C T T C A G T A G C G T A C G T C A T C G A A T G C A G T C