Information for 2-ACCTGCCYKCTGGKCC (Motif 2)

T C G A A G T C G T A C C G A T C T A G A G T C A G T C G A T C A C G T A G T C C G A T A C T G C T A G A C T G A G T C A G T C
Reverse Opposite:
C T A G A C T G G T A C A G T C G T A C C G T A A C T G T G C A C T A G A C T G A C T G A G T C C G T A A C T G C T A G A G C T
p-value:1e-9
log p-value:-2.203e+01
Information Content per bp:1.780
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif4.80%
Number of Background Sequences with motif30.7
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets43.2 +/- 24.2bp
Average Position of motif in Background53.8 +/- 32.9bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:1
Score:0.64
Offset:5
Orientation:forward strand
Alignment:ACCTGCCYKCTGGKCC
-----CCTGCTGAGH-
 T C G A A G T C G T A C C G A T C T A G A G T C A G T C G A T C A C G T A G T C C G A T A C T G C T A G A C T G A G T C A G T C
A C G T A C G T A C G T A C G T A C G T A G T C G T A C A G C T C T A G A G T C C G A T A C T G C G T A A C T G G T C A A C G T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:2
Score:0.61
Offset:0
Orientation:forward strand
Alignment:ACCTGCCYKCTGGKCC
GGCCYCCTGCTGDGH-
 T C G A A G T C G T A C C G A T C T A G A G T C A G T C G A T C A C G T A G T C C G A T A C T G C T A G A C T G A G T C A G T C
C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C A C G T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:3
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:ACCTGCCYKCTGGKCC
--CCCCCTGCTGTG--
 T C G A A G T C G T A C C G A T C T A G A G T C A G T C G A T C A C G T A G T C C G A T A C T G C T A G A C T G A G T C A G T C
A C G T A C G T G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G A C G T A C G T

TFAP2B(var.3)/MA0813.1/Jaspar

Match Rank:4
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:ACCTGCCYKCTGGKCC
---TGCCCTNAGGGCA
 T C G A A G T C G T A C C G A T C T A G A G T C A G T C G A T C A C G T A G T C C G A T A C T G C T A G A C T G A G T C A G T C
A C G T A C G T A C G T G C A T A T C G A G T C A G T C A G T C A G C T T G A C T C G A T C A G A C T G A C T G A T G C C G T A

TFAP2A(var.3)/MA0872.1/Jaspar

Match Rank:5
Score:0.60
Offset:3
Orientation:forward strand
Alignment:ACCTGCCYKCTGGKCC
---TGCCCTGAGGGCA
 T C G A A G T C G T A C C G A T C T A G A G T C A G T C G A T C A C G T A G T C C G A T A C T G C T A G A C T G A G T C A G T C
A C G T A C G T A C G T G C A T A T C G A G T C A G T C A G T C A G C T A T C G T C G A T C A G A C T G A C T G A T G C C G T A

TFAP2C(var.3)/MA0815.1/Jaspar

Match Rank:6
Score:0.60
Offset:3
Orientation:forward strand
Alignment:ACCTGCCYKCTGGKCC
---TGCCCTGAGGGCA
 T C G A A G T C G T A C C G A T C T A G A G T C A G T C G A T C A C G T A G T C C G A T A C T G C T A G A C T G A G T C A G T C
A C G T A C G T A C G T G C A T A T C G A G T C A G T C A G T C A G C T A T C G T C G A T C A G A C T G A C T G A T G C C G T A

PB0206.1_Zic2_2/Jaspar

Match Rank:7
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:ACCTGCCYKCTGGKCC-
--TCNCCTGCTGNGNNN
 T C G A A G T C G T A C C G A T C T A G A G T C A G T C G A T C A C G T A G T C C G A T A C T G C T A G A C T G A G T C A G T C A C G T
A C G T A C G T G C A T A G T C A C G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G A C T C A T G C T A G

PB0193.1_Tcfe2a_2/Jaspar

Match Rank:8
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:ACCTGCCYKCTGGKCC-
CCNNACCATCTGGCCTN
 T C G A A G T C G T A C C G A T C T A G A G T C A G T C G A T C A C G T A G T C C G A T A C T G C T A G A C T G A G T C A G T C A C G T
A G T C T A G C T A C G C T A G T C G A G T A C A G T C C G T A A G C T T G A C A G C T C A T G A T C G G T A C G A T C A G C T C A G T

PB0207.1_Zic3_2/Jaspar

Match Rank:9
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:ACCTGCCYKCTGGKCC-
--NNTCCTGCTGTGNNN
 T C G A A G T C G T A C C G A T C T A G A G T C A G T C G A T C A C G T A G T C C G A T A C T G C T A G A C T G A G T C A G T C A C G T
A C G T A C G T G C A T A T C G C A G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G G A C T A C T G G A T C G C A T G T A C

PB0205.1_Zic1_2/Jaspar

Match Rank:10
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:ACCTGCCYKCTGGKCC-
--TNTCCTGCTGTGNNG
 T C G A A G T C G T A C C G A T C T A G A G T C A G T C G A T C A C G T A G T C C G A T A C T G C T A G A C T G A G T C A G T C A C G T
A C G T A C G T G C A T A G T C C A G T T G A C G T A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G C A T C A T G T C A G