Information for 12-GTGAGTGGGAAGAGRC (Motif 20)

A C T G A C G T A T C G C T G A A C T G A C G T A C T G A C T G A C T G G T C A C T G A T A C G C G T A A C T G T C A G A G T C
Reverse Opposite:
T A C G A G C T A G T C A C G T A G T C A G C T A C G T A G T C G T A C G T A C G T C A G T A C A G C T A T G C G T C A G T A C
p-value:1e-7
log p-value:-1.770e+01
Information Content per bp:1.741
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.97%
Number of Background Sequences with motif13.3
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets60.0 +/- 21.9bp
Average Position of motif in Background47.4 +/- 22.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.33
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0114.1_Egr1_2/Jaspar

Match Rank:1
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--GTGAGTGGGAAGAGRC
TGCGGAGTGGGACTGG--
 A C G T A C G T A C T G A C G T A T C G C T G A A C T G A C G T A C T G A C T G A C T G G T C A C T G A T A C G C G T A A C T G T C A G A G T C
A C G T A C T G G A T C A C T G C T A G T C G A C T A G C A G T C T A G C A T G C A T G C G T A G A T C G C A T C T A G A C T G A C G T A C G T

PB0124.1_Gabpa_2/Jaspar

Match Rank:2
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:GTGAGTGGGAAGAGRC
NNNNGGGGGAAGANGG
 A C T G A C G T A T C G C T G A A C T G A C G T A C T G A C T G A C T G G T C A C T G A T A C G C G T A A C T G T C A G A G T C
C T A G A C G T A T C G T C G A C T A G C A T G T A C G C T A G C T A G C T G A C G T A C T A G T G C A G A T C C T A G A C T G

ZSCAN22(Zf)/HEK293-ZSCAN22.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:3
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----GTGAGTGGGAAGAGRC
SMCAGTCWGAKGGAGGAGGC
 A C G T A C G T A C G T A C G T A C T G A C G T A T C G C T G A A C T G A C G T A C T G A C T G A C T G G T C A C T G A T A C G C G T A A C T G T C A G A G T C
A T C G T G A C A T G C C T G A T C A G G A C T A G T C C G A T T C A G T C G A C A T G C T A G C T A G C G T A C T A G C T A G C T G A C T A G C T A G A T G C

ZNF189(Zf)/HEK293-ZNF189.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:4
Score:0.62
Offset:6
Orientation:forward strand
Alignment:GTGAGTGGGAAGAGRC
------TGGAACAGMA
 A C T G A C G T A T C G C T G A A C T G A C G T A C T G A C T G A C T G G T C A C T G A T A C G C G T A A C T G T C A G A G T C
A C G T A C G T A C G T A C G T A C G T A C G T C A G T A C T G T C A G T G C A G C T A A T G C T C G A A T C G G T C A T G C A

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:5
Score:0.61
Offset:3
Orientation:forward strand
Alignment:GTGAGTGGGAAGAGRC
---RGKGGGCGGAGC-
 A C T G A C G T A T C G C T G A A C T G A C G T A C T G A C T G A C T G G T C A C T G A T A C G C G T A A C T G T C A G A G T C
A C G T A C G T A C G T C T G A T C A G C A G T C T A G A C T G C T A G G A T C A T C G A C T G C T G A T C A G G A T C A C G T

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:6
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:GTGAGTGGGAAGAGRC
---CSTGGGAAAD---
 A C T G A C G T A T C G C T G A A C T G A C G T A C T G A C T G A C T G G T C A C T G A T A C G C G T A A C T G T C A G A G T C
A C G T A C G T A C G T A G T C T A C G C G A T A C T G C T A G A C T G C G T A C T G A G T C A C T G A A C G T A C G T A C G T

E2F6/MA0471.1/Jaspar

Match Rank:7
Score:0.58
Offset:2
Orientation:forward strand
Alignment:GTGAGTGGGAAGAGRC
--GGGCGGGAAGG---
 A C T G A C G T A T C G C T G A A C T G A C G T A C T G A C T G A C T G G T C A C T G A T A C G C G T A A C T G T C A G A G T C
A C G T A C G T C T A G T C A G A C T G G T A C C T A G A C T G T A C G C G T A C T G A T C A G T C A G A C G T A C G T A C G T

Egr1(Zf)/K562-Egr1-ChIP-Seq(GSE32465)/Homer

Match Rank:8
Score:0.58
Offset:1
Orientation:forward strand
Alignment:GTGAGTGGGAAGAGRC
-TGCGTGGGYG-----
 A C T G A C G T A T C G C T G A A C T G A C G T A C T G A C T G A C T G G T C A C T G A T A C G C G T A A C T G T C A G A G T C
A C G T C A G T T C A G G A T C A C T G A C G T C T A G A C T G A C T G G A C T C T A G A C G T A C G T A C G T A C G T A C G T

EGR1/MA0162.2/Jaspar

Match Rank:9
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:GTGAGTGGGAAGAGRC
-GGCGGGGGCGGGGG-
 A C T G A C G T A T C G C T G A A C T G A C G T A C T G A C T G A C T G G T C A C T G A T A C G C G T A A C T G T C A G A G T C
A C G T A C T G T A C G G T A C C T A G C A T G T C A G C T A G A C T G G A T C C T A G C A T G T C A G C T A G T A C G A C G T

PB0167.1_Sox13_2/Jaspar

Match Rank:10
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---GTGAGTGGGAAGAGRC
GTATTGGGTGGGTAATT--
 A C G T A C G T A C G T A C T G A C G T A T C G C T G A A C T G A C G T A C T G A C T G A C T G G T C A C T G A T A C G C G T A A C T G T C A G A G T C
C T A G C G A T C T G A G A C T A G C T C A T G C A T G C T A G G C A T A C T G C A T G C A T G C G A T G C T A G C A T G C A T C A G T A C G T A C G T