Information for 7-CTGTCCTCTTCTG (Motif 18)

A G T C C G A T A C T G A C G T G T A C A G T C A C G T A G T C A C G T C G A T A G T C C G A T A C T G
Reverse Opposite:
A G T C C G T A A C T G C G T A C G T A A C T G C G T A A C T G A C T G C G T A A G T C C G T A A C T G
p-value:1e-7
log p-value:-1.800e+01
Information Content per bp:1.935
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.65%
Number of Background Sequences with motif2.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets70.8 +/- 24.4bp
Average Position of motif in Background66.3 +/- 23.7bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:1
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:CTGTCCTCTTCTG
-TGACCTYA----
 A G T C C G A T A C T G A C G T G T A C A G T C A C G T A G T C A C G T C G A T A G T C C G A T A C T G
A C G T A G C T C T A G G C T A T G A C A T G C A G C T A G T C C G T A A C G T A C G T A C G T A C G T

THRa(NR)/C17.2-THRa-ChIP-Seq(GSE38347)/Homer

Match Rank:2
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:CTGTCCTCTTCTG---
-TGWCCTCARNTGACC
 A G T C C G A T A C T G A C G T G T A C A G T C A C G T A G T C A C G T C G A T A G T C C G A T A C T G A C G T A C G T A C G T
A C G T G C A T T A C G C G T A G T A C A G T C G A C T A G T C T C G A T C A G T C G A C G A T T C A G T G C A G T A C G A T C

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:3
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---CTGTCCTCTTCTG----
ANAGTGCCACCTGGTGGCCA
 A C G T A C G T A C G T A G T C C G A T A C T G A C G T G T A C A G T C A C G T A G T C A C G T C G A T A G T C C G A T A C T G A C G T A C G T A C G T A C G T
T G C A A G C T C T G A A T C G G A C T C T A G G T A C G A T C G T C A A G T C G T A C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

CTCF/MA0139.1/Jaspar

Match Rank:4
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--CTGTCCTCTTCTG----
TAGCGCCCCCTGGTGGCCA
 A C G T A C G T A G T C C G A T A C T G A C G T G T A C A G T C A C G T A G T C A C G T C G A T A G T C C G A T A C T G A C G T A C G T A C G T A C G T
A G C T C T G A A T C G G A T C C A T G G T A C G A T C G T A C G A T C G A T C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

PB0141.1_Isgf3g_2/Jaspar

Match Rank:5
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:CTGTCCTCTTCTG-
NNGTANTGTTTTNC
 A G T C C G A T A C T G A C G T G T A C A G T C A C G T A G T C A C G T C G A T A G T C C G A T A C T G A C G T
G A C T C T G A C A T G C G A T G T C A T G C A G C A T A T C G G A C T G C A T G C A T G C A T A T C G T G A C

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:6
Score:0.55
Offset:-5
Orientation:forward strand
Alignment:-----CTGTCCTCTTCTG--
CNNBRGCGCCCCCTGSTGGC
 A C G T A C G T A C G T A C G T A C G T A G T C C G A T A C T G A C G T G T A C A G T C A C G T A G T C A C G T C G A T A G T C C G A T A C T G A C G T A C G T
T A G C A G T C T G A C A G T C C T A G A T C G A G T C C A T G T G A C A G T C G T A C A G T C A G T C G C A T C T A G A T C G G C A T A C T G A T C G G A T C

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:7
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:CTGTCCTCTTCTG
-TGACCYCT----
 A G T C C G A T A C T G A C G T G T A C A G T C A C G T A G T C A C G T C G A T A G T C C G A T A C T G
A C G T A G C T T C A G T G C A G T A C T G A C A G C T A G T C A G C T A C G T A C G T A C G T A C G T

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:CTGTCCTCTTCTG
CTGACCTTTG---
 A G T C C G A T A C T G A C G T G T A C A G T C A C G T A G T C A C G T C G A T A G T C C G A T A C T G
A T G C A C G T T A C G T G C A G T A C A G T C G A C T A G C T A C G T T C A G A C G T A C G T A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:9
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-CTGTCCTCTTCTG
GCTGTG--------
 A C G T A G T C C G A T A C T G A C G T G T A C A G T C A C G T A G T C A C G T C G A T A G T C C G A T A C T G
T A C G T A G C C A G T A T C G G A C T A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

FOXA1:AR(Forkhead,NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:10
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-CTGTCCTCTTCTG------
NNTGTTCTTTTTTGTTTACT
 A C G T A G T C C G A T A C T G A C G T G T A C A G T C A C G T A G T C A C G T C G A T A G T C C G A T A C T G A C G T A C G T A C G T A C G T A C G T A C G T
G C A T G C T A C G A T A T C G G C A T C G A T G A T C G A C T G C A T A G C T A G C T A G C T G C A T T C A G A C G T A C G T A C G T C T G A G A T C G C A T