Information for 10-TCAKACTMHABCCAAY (Motif 16)

C G A T A G T C C G T A A C T G C G T A G T A C A G C T T G A C G T A C T G C A A G T C G T A C G T A C G C T A G T C A A G C T
Reverse Opposite:
C T G A A C G T C G A T C A T G A C T G T C A G A C G T C A T G A C T G T C G A C A T G G C A T T G A C A C G T A C T G G C T A
p-value:1e-8
log p-value:-1.956e+01
Information Content per bp:1.632
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.94%
Number of Background Sequences with motif92.7
Percentage of Background Sequences with motif0.19%
Average Position of motif in Targets62.3 +/- 24.4bp
Average Position of motif in Background49.9 +/- 22.8bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL002.1_INR/Jaspar

Match Rank:1
Score:0.61
Offset:0
Orientation:forward strand
Alignment:TCAKACTMHABCCAAY
TCAGTCTT--------
 C G A T A G T C C G T A A C T G C G T A G T A C A G C T T G A C G T A C T G C A A G T C G T A C G T A C G C T A G T C A A G C T
C A G T A G T C C G T A A T C G G A C T G A T C A G C T A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NFY(CCAAT)/Promoter/Homer

Match Rank:2
Score:0.52
Offset:9
Orientation:forward strand
Alignment:TCAKACTMHABCCAAY---
---------AGCCAATCGG
 C G A T A G T C C G T A A C T G C G T A G T A C A G C T T G A C G T A C T G C A A G T C G T A C G T A C G C T A G T C A A G C T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A C T A G A G T C A G T C C G T A C G T A A C G T T A G C T C A G T A C G

POL004.1_CCAAT-box/Jaspar

Match Rank:3
Score:0.51
Offset:6
Orientation:forward strand
Alignment:TCAKACTMHABCCAAY--
------ACTAGCCAATCA
 C G A T A G T C C G T A A C T G C G T A G T A C A G C T T G A C G T A C T G C A A G T C G T A C G T A C G C T A G T C A A G C T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G T C A A G T C G A C T C T G A C T A G A G T C A G T C C G T A C G T A C G A T T A G C T C G A

MAFG::NFE2L1/MA0089.1/Jaspar

Match Rank:4
Score:0.51
Offset:-1
Orientation:reverse strand
Alignment:-TCAKACTMHABCCAAY
GTCATN-----------
 A C G T C G A T A G T C C G T A A C T G C G T A G T A C A G C T T G A C G T A C T G C A A G T C G T A C G T A C G C T A G T C A A G C T
T C A G A C G T G A T C C G T A A G C T A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NFIC/MA0161.1/Jaspar

Match Rank:5
Score:0.49
Offset:9
Orientation:reverse strand
Alignment:TCAKACTMHABCCAAY
---------TGCCAA-
 C G A T A G T C C G T A A C T G C G T A G T A C A G C T T G A C G T A C T G C A A G T C G T A C G T A C G C T A G T C A A G C T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C A T C A T G G A T C A G T C G T C A C T G A A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:6
Score:0.47
Offset:0
Orientation:reverse strand
Alignment:TCAKACTMHABCCAAY
BCAGACWA--------
 C G A T A G T C C G T A A C T G C G T A G T A C A G C T T G A C G T A C T G C A A G T C G T A C G T A C G C T A G T C A A G C T
A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer

Match Rank:7
Score:0.46
Offset:-3
Orientation:forward strand
Alignment:---TCAKACTMHABCCAAY
GKVTCADRTTWC-------
 A C G T A C G T A C G T C G A T A G T C C G T A A C T G C G T A G T A C A G C T T G A C G T A C T G C A A G T C G T A C G T A C G C T A G T C A A G C T
C T A G C A T G T G C A A C G T A G T C C G T A C A T G T C A G A C G T A C G T G C T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0098.1_Zfp410_1/Jaspar

Match Rank:8
Score:0.46
Offset:3
Orientation:reverse strand
Alignment:TCAKACTMHABCCAAY----
---NNNTCCATCCCATAANN
 C G A T A G T C C G T A A C T G C G T A G T A C A G C T T G A C G T A C T G C A A G T C G T A C G T A C G C T A G T C A A G C T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G C A T G T C A A C G T T G A C G A T C G C T A A G C T G A T C G A T C G A T C C G T A C A G T G C T A G T C A A G C T G C T A

NFYB/MA0502.1/Jaspar

Match Rank:9
Score:0.46
Offset:4
Orientation:forward strand
Alignment:TCAKACTMHABCCAAY---
----AAATGGACCAATCAG
 C G A T A G T C C G T A A C T G C G T A G T A C A G C T T G A C G T A C T G C A A G T C G T A C G T A C G C T A G T C A A G C T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T C G A G T C A G T C A A G C T A T C G T C A G C T G A A G T C A G T C C G T A C T G A A C G T T A G C T C G A T A C G

PB0201.1_Zfp281_2/Jaspar

Match Rank:10
Score:0.46
Offset:2
Orientation:forward strand
Alignment:TCAKACTMHABCCAAY---
--AGGAGACCCCCAATTTG
 C G A T A G T C C G T A A C T G C G T A G T A C A G C T T G A C G T A C T G C A A G T C G T A C G T A C G C T A G T C A A G C T A C G T A C G T A C G T
A C G T A C G T C G T A C A T G C A T G C G T A C A T G C T G A T G A C G T A C T A G C A G T C G T A C G C T A G C T A C G A T C G A T C G A T T C A G