Information for 6-CACCAGGGTGCAGVTT (Motif 9)

A T G C C G T A G T A C A T G C G T C A C A T G A C T G A T C G A C G T A C T G A G T C C G T A A C T G T A C G A C G T C G A T
Reverse Opposite:
G C T A G T C A A G T C A G T C A C G T C T A G A G T C C G T A T A G C A G T C G A T C A C G T A T C G A C T G C G A T A T C G
p-value:1e-11
log p-value:-2.582e+01
Information Content per bp:1.786
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.74%
Number of Background Sequences with motif0.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets39.2 +/- 30.0bp
Average Position of motif in Background76.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SPDEF/MA0686.1/Jaspar

Match Rank:1
Score:0.57
Offset:1
Orientation:forward strand
Alignment:CACCAGGGTGCAGVTT
-ACCCGGATGTA----
 A T G C C G T A G T A C A T G C G T C A C A T G A C T G A T C G A C G T A C T G A G T C C G T A A C T G T A C G A C G T C G A T
A C G T C G T A T G A C T A G C G T A C T A C G C A T G C T G A G C A T T C A G G A C T C T G A A C G T A C G T A C G T A C G T

KLF3(Zf)/MEF-Klf3-ChIP-Seq(GSE44748)/Homer

Match Rank:2
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:CACCAGGGTGCAGVTT
-NNVDGGGYGGGGCYN
 A T G C C G T A G T A C A T G C G T C A C A T G A C T G A T C G A C G T A C T G A G T C C G T A A C T G T A C G A C G T C G A T
A C G T T A C G T G A C T C A G C T G A A C T G A C T G A C T G A G C T A C T G A C T G C T A G A C T G A G T C A G T C C T G A

Klf1/MA0493.1/Jaspar

Match Rank:3
Score:0.55
Offset:4
Orientation:reverse strand
Alignment:CACCAGGGTGCAGVTT
----TGGGTGTGGCN-
 A T G C C G T A G T A C A T G C G T C A C A T G A C T G A T C G A C G T A C T G A G T C C G T A A C T G T A C G A C G T C G A T
A C G T A C G T A C G T A C G T C G A T C T A G A C T G A C T G G A C T A C T G C A G T C T A G A C T G A G T C G A T C A C G T

EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer

Match Rank:4
Score:0.54
Offset:3
Orientation:forward strand
Alignment:CACCAGGGTGCAGVTT
---NTGGGTGTGGCC-
 A T G C C G T A G T A C A T G C G T C A C A T G A C T G A T C G A C G T A C T G A G T C C G T A A C T G T A C G A C G T C G A T
A C G T A C G T A C G T T G A C C G A T A C T G A C T G A C T G G A C T A C T G A C G T A C T G A C T G G A T C G A T C A C G T

SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer

Match Rank:5
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:CACCAGGGTGCAGVTT
-ANCAGGATGT-----
 A T G C C G T A G T A C A T G C G T C A C A T G A C T G A T C G A C G T A C T G A G T C C G T A A C T G T A C G A C G T C G A T
A C G T C G T A T A G C G T A C G T C A A C T G A C T G C G T A C G A T T A C G A G C T A C G T A C G T A C G T A C G T A C G T

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:6
Score:0.53
Offset:-4
Orientation:reverse strand
Alignment:----CACCAGGGTGCAGVTT
TGGCCACCAGGTGGCACTNT
 A C G T A C G T A C G T A C G T A T G C C G T A G T A C A T G C G T C A C A T G A C T G A T C G A C G T A C T G A G T C C G T A A C T G T A C G A C G T C G A T
G A C T C A T G C T A G G T A C G A T C C G T A T A G C G A T C C T G A A C T G T C A G C A G T C T A G C A T G G A T C C T G A T A G C G A C T T C G A A C G T

Klf4/MA0039.2/Jaspar

Match Rank:7
Score:0.52
Offset:4
Orientation:forward strand
Alignment:CACCAGGGTGCAGVTT
----TGGGTGGGGC--
 A T G C C G T A G T A C A T G C G T C A C A T G A C T G A T C G A C G T A C T G A G T C C G T A A C T G T A C G A C G T C G A T
A C G T A C G T A C G T A C G T C G A T T C A G C T A G A T C G G A C T C A T G A C T G C T A G A C T G A G T C A C G T A C G T

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:8
Score:0.52
Offset:-2
Orientation:reverse strand
Alignment:--CACCAGGGTGCAGVTT--
GCCASCAGGGGGCGCYVNNG
 A C G T A C G T A T G C C G T A G T A C A T G C G T C A C A T G A C T G A T C G A C G T A C T G A G T C C G T A A C T G T A C G A C G T C G A T A C G T A C G T
C T A G T A G C A G T C C G T A T A G C G A T C C G T A A C T G C T A G C A T G A C T G A C T G G T A C C T A G A T G C G A T C T C A G A C T G T C A G A T C G

PB0077.1_Spdef_1/Jaspar

Match Rank:9
Score:0.51
Offset:-3
Orientation:reverse strand
Alignment:---CACCAGGGTGCAGVTT
AANNATCCGGATGTNN---
 A C G T A C G T A C G T A T G C C G T A G T A C A T G C G T C A C A T G A C T G A T C G A C G T A C T G A G T C C G T A A C T G T A C G A C G T C G A T
T C G A C T G A C T G A C G T A C G T A G A C T T A G C T G A C A C T G A C T G C G T A G C A T T C A G G A C T C T G A A G T C A C G T A C G T A C G T

Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer

Match Rank:10
Score:0.51
Offset:4
Orientation:reverse strand
Alignment:CACCAGGGTGCAGVTT
----TGGGTGTGGC--
 A T G C C G T A G T A C A T G C G T C A C A T G A C T G A T C G A C G T A C T G A G T C C G T A A C T G T A C G A C G T C G A T
A C G T A C G T A C G T A C G T C G A T A C T G A C T G A C T G A G C T A C T G A C G T C T A G C A T G G A T C A C G T A C G T