Information for 4-AATGDCTAGCAACATT (Motif 5)

G T C A C T G A C G A T C T A G C A G T A G T C C G A T C G T A C T A G A T G C C G T A C T G A G T A C C G T A A C G T A C G T
Reverse Opposite:
C G T A C G T A A C G T A C T G A G C T C G A T A T C G A G T C A C G T C G T A A C T G G T C A A G T C C G T A A G C T A C G T
p-value:1e-11
log p-value:-2.680e+01
Information Content per bp:1.811
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.18%
Number of Background Sequences with motif9.4
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets65.9 +/- 25.7bp
Average Position of motif in Background41.9 +/- 32.9bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Arid5a/MA0602.1/Jaspar

Match Rank:1
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:AATGDCTAGCAACATT--
----NNTNNCAATATTAG
 G T C A C T G A C G A T C T A G C A G T A G T C C G A T C G T A C T A G A T G C C G T A C T G A G T A C C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C G A T G C A T G A C T G C T A A C T G G A T C C T G A C G T A C G A T G C T A G C A T G A C T C T G A A T C G

PB0002.1_Arid5a_1/Jaspar

Match Rank:2
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:AATGDCTAGCAACATT--
----NNTNNCAATATTAG
 G T C A C T G A C G A T C T A G C A G T A G T C C G A T C G T A C T A G A T G C C G T A C T G A G T A C C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C G A T G C A T G A C T G C T A A C T G G A T C C T G A C G T A C G A T G C T A G C A T G A C T C T G A A T C G

Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.53
Offset:3
Orientation:forward strand
Alignment:AATGDCTAGCAACATT
---SCCTAGCAACAG-
 G T C A C T G A C G A T C T A G C A G T A G T C C G A T C G T A C T A G A T G C C G T A C T G A G T A C C G T A A C G T A C G T
A C G T A C G T A C G T A T G C A G T C G T A C A G C T T C G A C T A G G A T C C T G A G T C A A G T C G C T A T C A G A C G T

CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer

Match Rank:4
Score:0.53
Offset:6
Orientation:reverse strand
Alignment:AATGDCTAGCAACATT
------TTGCAACATN
 G T C A C T G A C G A T C T A G C A G T A G T C C G A T C G T A C T A G A T G C C G T A C T G A G T A C C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C A G T A C G T C T A G A G T C G T C A C G T A G A T C G C T A A G C T G A T C

Prop1(Homeobox)/GHFT1-PROP1.biotin-ChIP-Seq(GSE77302)/Homer

Match Rank:5
Score:0.51
Offset:5
Orientation:forward strand
Alignment:AATGDCTAGCAACATT-
-----NTAATBNAATTA
 G T C A C T G A C G A T C T A G C A G T A G T C C G A T C G T A C T A G A T G C C G T A C T G A G T A C C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G T A C G C A T C T G A C G T A G A C T A G C T C A T G T G C A C T G A A C G T G A C T C G T A

PROP1/MA0715.1/Jaspar

Match Rank:6
Score:0.50
Offset:6
Orientation:reverse strand
Alignment:AATGDCTAGCAACATT-
------TAATTAAATTA
 G T C A C T G A C G A T C T A G C A G T A G T C C G A T C G T A C T A G A T G C C G T A C T G A G T A C C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G C A T C T G A C G T A G A C T C A G T G C T A C T G A C G T A A G C T C G A T C G T A

Phox2a(Homeobox)/Neuron-Phox2a-ChIP-Seq(GSE31456)/Homer

Match Rank:7
Score:0.50
Offset:5
Orientation:forward strand
Alignment:AATGDCTAGCAACATT-
-----YTAATYNRATTA
 G T C A C T G A C G A T C T A G C A G T A G T C C G A T C G T A C T A G A T G C C G T A C T G A G T A C C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G A T C G C A T C T G A C G T A A G C T A G C T C G T A T C G A C T G A A C G T G C A T C G T A

PB0155.1_Osr2_2/Jaspar

Match Rank:8
Score:0.49
Offset:0
Orientation:forward strand
Alignment:AATGDCTAGCAACATT
ACTTGCTACCTACACC
 G T C A C T G A C G A T C T A G C A G T A G T C C G A T C G T A C T A G A T G C C G T A C T G A G T A C C G T A A C G T A C G T
C T G A G A T C G A C T G A C T T A C G A G T C G A C T G C T A G T A C G A T C G C A T T C G A G T A C C G T A A G C T T G A C

TEAD4/MA0809.1/Jaspar

Match Rank:9
Score:0.49
Offset:10
Orientation:forward strand
Alignment:AATGDCTAGCAACATT----
----------CACATTCCAT
 G T C A C T G A C G A T C T A G C A G T A G T C C G A T C G T A C T A G A T G C C G T A C T G A G T A C C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G T A C C T G A T G A C C G T A C G A T C G A T A G T C G A T C C G T A G A C T

PH0068.1_Hoxc13/Jaspar

Match Rank:10
Score:0.48
Offset:1
Orientation:forward strand
Alignment:AATGDCTAGCAACATT-
-AAAGCTCGTAAAATTT
 G T C A C T G A C G A T C T A G C A G T A G T C C G A T C G T A C T A G A T G C C G T A C T G A G T A C C G T A A C G T A C G T A C G T
A C G T G C A T G C T A C G T A A C T G T A G C A G C T G A T C C T A G A G C T C G T A C G T A C G T A G C T A G C A T A G C T C G A T