Information for 5-AAAGAAACGT (Motif 26)

C T G A C G T A C T G A A C T G C G T A C G T A C G T A A G T C A C T G A G C T
Reverse Opposite:
C T G A A G T C A C T G C G A T A C G T A C G T A G T C A G C T A C G T A G C T
p-value:1e-7
log p-value:-1.628e+01
Information Content per bp:1.886
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.18%
Number of Background Sequences with motif35.1
Percentage of Background Sequences with motif0.08%
Average Position of motif in Targets44.1 +/- 26.0bp
Average Position of motif in Background54.6 +/- 26.5bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hes2/MA0616.1/Jaspar

Match Rank:1
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-AAAGAAACGT--
TAACGACACGTGC
 A C G T C T G A C G T A C T G A A C T G C G T A C G T A C G T A A G T C A C T G A G C T A C G T A C G T
A C G T C G T A C G T A T A G C A T C G C T G A G T A C C T G A G T A C C T A G A C G T C T A G G T A C

PB0137.1_Irf3_2/Jaspar

Match Rank:2
Score:0.61
Offset:0
Orientation:forward strand
Alignment:AAAGAAACGT----
GGAGAAAGGTGCGA
 C T G A C G T A C T G A A C T G C G T A C G T A C G T A A G T C A C T G A G C T A C G T A C G T A C G T A C G T
C T A G C A T G C G T A C T A G C G T A G C T A C G T A A T C G T A C G C G A T A T C G A G T C C T A G C T G A

Foxd3/MA0041.1/Jaspar

Match Rank:3
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:AAAGAAACGT--
AAACAAACATTC
 C T G A C G T A C T G A A C T G C G T A C G T A C G T A A G T C A C T G A G C T A C G T A C G T
C T G A T G C A C T G A G A T C G T C A C G T A C G T A G A T C C T G A C G A T C G A T G A T C

Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer

Match Rank:4
Score:0.56
Offset:0
Orientation:forward strand
Alignment:AAAGAAACGT
RAACAATGGN
 C T G A C G T A C T G A A C T G C G T A C G T A C G T A A G T C A C T G A G C T
C T G A T C G A C G T A A T G C C G T A C G T A C G A T C T A G T C A G G A T C

PB0033.1_Irf3_1/Jaspar

Match Rank:5
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----AAAGAAACGT
GAGAACCGAAACTG
 A C G T A C G T A C G T A C G T C T G A C G T A C T G A A C T G C G T A C G T A C G T A A G T C A C T G A G C T
A C T G C T G A C T A G C G T A G C T A G T A C T A G C C T A G T C G A G C T A G C T A A T G C G A C T C T A G

PB0192.1_Tcfap2e_2/Jaspar

Match Rank:6
Score:0.56
Offset:-6
Orientation:forward strand
Alignment:------AAAGAAACGT
TACTGGAAAAAAAA--
 A C G T A C G T A C G T A C G T A C G T A C G T C T G A C G T A C T G A A C T G C G T A C G T A C G T A A G T C A C T G A G C T
G C A T C T G A T G A C C A G T A C G T T C A G C G T A C G T A T C G A T C G A G C T A G T C A C G T A C T G A A C G T A C G T

Sox3/MA0514.1/Jaspar

Match Rank:7
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-AAAGAAACGT
AAAACAAAGG-
 A C G T C T G A C G T A C T G A A C T G C G T A C G T A C G T A A G T C A C T G A G C T
T C G A T C G A T C G A C G T A A T G C C G T A C G T A C G T A C T A G T A C G A C G T

T1ISRE(IRF)/ThioMac-Ifnb-Expression/Homer

Match Rank:8
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:AAAGAAACGT----
--AGAAACGAAAGT
 C T G A C G T A C T G A A C T G C G T A C G T A C G T A A G T C A C T G A G C T A C G T A C G T A C G T A C G T
A C G T A C G T T C G A C T A G C T G A C G T A C G T A A G T C T A C G C G T A C G T A C G T A A T C G A C G T

PB0175.1_Sox4_2/Jaspar

Match Rank:9
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-AAAGAAACGT------
GGAAAAATTGTTAGGAA
 A C G T C T G A C G T A C T G A A C T G C G T A C G T A C G T A A G T C A C T G A G C T A C G T A C G T A C G T A C G T A C G T A C G T
T A C G T C A G G C T A C G T A C T G A C T G A C T G A A G C T C G A T T C A G C G A T G A C T C T G A T A C G C T A G C T G A C T G A

PH0044.1_Homez/Jaspar

Match Rank:10
Score:0.55
Offset:0
Orientation:forward strand
Alignment:AAAGAAACGT-------
AAAACATCGTTTTTAAG
 C T G A C G T A C T G A A C T G C G T A C G T A C G T A A G T C A C T G A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C G T A G C A T G C T A G C T A T G A C G C T A A C G T G T A C A C T G C G A T C G A T G C A T G A C T A G C T G C T A C T G A C T A G