Information for 15-AGARAGARACAWRCMM (Motif 21)

C G T A A C T G C G T A C T G A C G T A A T C G C G T A C T G A C G T A T A G C C G T A C G T A C T G A A G T C G T C A G T C A
Reverse Opposite:
A C G T A C G T A C T G A G C T C G A T A C G T A C T G A C G T A G C T A C G T A T G C A C G T A G C T A C G T A G T C A C G T
p-value:1e-8
log p-value:-2.001e+01
Information Content per bp:1.850
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.59%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets61.2 +/- 15.8bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Foxd3/MA0041.1/Jaspar

Match Rank:1
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:AGARAGARACAWRCMM
--AAACAAACATTC--
 C G T A A C T G C G T A C T G A C G T A A T C G C G T A C T G A C G T A T A G C C G T A C G T A C T G A A G T C G T C A G T C A
A C G T A C G T C T G A T G C A C T G A G A T C G T C A C G T A C G T A G A T C C T G A C G A T C G A T G A T C A C G T A C G T

MF0005.1_Forkhead_class/Jaspar

Match Rank:2
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:AGARAGARACAWRCMM
--AAATAAACA-----
 C G T A A C T G C G T A C T G A C G T A A T C G C G T A C T G A C G T A T A G C C G T A C G T A C T G A A G T C G T C A G T C A
A C G T A C G T T C G A G T C A T C G A G A C T G T C A C T G A T C G A G A T C C G T A A C G T A C G T A C G T A C G T A C G T

bZIP:IRF(bZIP,IRF)/Th17-BatF-ChIP-Seq(GSE39756)/Homer

Match Rank:3
Score:0.55
Offset:-6
Orientation:reverse strand
Alignment:------AGARAGARACAWRCMM
WNAGTCADAVTGAAACTN----
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C T G C G T A C T G A C G T A A T C G C G T A C T G A C G T A T A G C C G T A C G T A C T G A A G T C G T C A G T C A
G C A T T A C G C G T A A T C G G C A T T A G C G C T A C G T A G C T A T G C A C G A T T C A G C T G A T C G A T C G A T A G C G A C T T C A G A C G T A C G T A C G T A C G T

Foxj3/MA0851.1/Jaspar

Match Rank:4
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-AGARAGARACAWRCMM
AAAAAGTAAACAAACAC
 A C G T C G T A A C T G C G T A C T G A C G T A A T C G C G T A C T G A C G T A T A G C C G T A C G T A C T G A A G T C G T C A G T C A
G C T A C T G A G T C A C G T A C T G A T C A G G A C T G T C A G C T A C G T A A G T C C G T A G C T A G C T A T A G C T G A C G T A C

PB0017.1_Foxj3_1/Jaspar

Match Rank:5
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-AGARAGARACAWRCMM
AAAAAGTAAACAAACAC
 A C G T C G T A A C T G C G T A C T G A C G T A A T C G C G T A C T G A C G T A T A G C C G T A C G T A C T G A A G T C G T C A G T C A
G C T A C T G A G T C A C G T A C T G A T C A G G A C T G T C A G C T A C G T A A G T C C G T A G C T A G C T A T A G C T G A C G T A C

IRF:BATF(IRF:bZIP)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer

Match Rank:6
Score:0.52
Offset:-5
Orientation:reverse strand
Alignment:-----AGARAGARACAWRCMM
BAGTCATANTGAAAG------
 A C G T A C G T A C G T A C G T A C G T C G T A A C T G C G T A C T G A C G T A A T C G C G T A C T G A C G T A T A G C C G T A C G T A C T G A A G T C G T C A G T C A
A C T G C G T A A T C G C G A T T G A C C G T A C G A T G C T A G T C A C G A T T C A G C T G A C T G A C T G A T A C G A C G T A C G T A C G T A C G T A C G T A C G T

FOXP1/MA0481.1/Jaspar

Match Rank:7
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-AGARAGARACAWRCMM
CAAAAGTAAACAAAG--
 A C G T C G T A A C T G C G T A C T G A C G T A A T C G C G T A C T G A C G T A T A G C C G T A C G T A C T G A A G T C G T C A G T C A
G T A C G C T A C G T A T C G A C T G A T C A G G C A T C G T A C G T A C G T A T G A C C G T A T G C A C G T A T C A G A C G T A C G T

STAT1::STAT2/MA0517.1/Jaspar

Match Rank:8
Score:0.51
Offset:-2
Orientation:reverse strand
Alignment:--AGARAGARACAWRCMM
GGAAANTGAAACTNA---
 A C G T A C G T C G T A A C T G C G T A C T G A C G T A A T C G C G T A C T G A C G T A T A G C C G T A C G T A C T G A A G T C G T C A G T C A
T C A G C T A G C T G A C G T A T C G A T G C A G A C T C T A G T C G A C G T A C T G A A T G C G A C T C T A G G T C A A C G T A C G T A C G T

Foxf1(Forkhead)/Lung-Foxf1-ChIP-Seq(GSE77951)/Homer

Match Rank:9
Score:0.51
Offset:0
Orientation:forward strand
Alignment:AGARAGARACAWRCMM
WWATRTAAACAN----
 C G T A A C T G C G T A C T G A C G T A A T C G C G T A C T G A C G T A T A G C C G T A C G T A C T G A A G T C G T C A G T C A
G C A T G C A T C T G A A C G T C T G A A C G T C G T A C G T A C G T A A G T C G T C A G T C A A C G T A C G T A C G T A C G T

ISRE(IRF)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:10
Score:0.51
Offset:-1
Orientation:reverse strand
Alignment:-AGARAGARACAWRCMM
GAAACTGAAACT-----
 A C G T C G T A A C T G C G T A C T G A C G T A A T C G C G T A C T G A C G T A T A G C C G T A C G T A C T G A A G T C G T C A G T C A
T C A G C T G A G T C A C G T A A T G C G A C T A T C G G T C A C T G A C T G A T A G C G A C T A C G T A C G T A C G T A C G T A C G T