Information for 14-RAGGSTTTYTASATKC (Motif 20)

C T G A C G T A A C T G A C T G A T G C A G C T A G C T A C G T G A T C A C G T C T G A A T C G C G T A C G A T A C G T A G T C
Reverse Opposite:
A C T G G T C A C G T A A C G T A T G C G A C T C G T A C T A G C G T A C T G A C T G A A T C G G T A C A G T C A C G T A G C T
p-value:1e-8
log p-value:-2.035e+01
Information Content per bp:1.849
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.74%
Number of Background Sequences with motif3.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets40.0 +/- 20.6bp
Average Position of motif in Background55.2 +/- 14.2bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0090.1_Zbtb12_1/Jaspar

Match Rank:1
Score:0.53
Offset:0
Orientation:forward strand
Alignment:RAGGSTTTYTASATKC-
CTAAGGTTCTAGATCAC
 C T G A C G T A A C T G A C T G A T G C A G C T A G C T A C G T G A T C A C G T C T G A A T C G C G T A C G A T A C G T A G T C A C G T
A T G C A C G T G C T A T C G A A C T G C T A G C G A T C G A T A G T C A G C T T C G A C T A G T C G A G C A T A G T C T G C A A G T C

POL012.1_TATA-Box/Jaspar

Match Rank:2
Score:0.50
Offset:-1
Orientation:reverse strand
Alignment:-RAGGSTTTYTASATKC
NNNNNNCTTTTATAN--
 A C G T C T G A C G T A A C T G A C T G A T G C A G C T A G C T A C G T G A T C A C G T C T G A A T C G C G T A C G A T A C G T A G T C
A T G C T A G C A T G C A T G C A T C G A T G C A G T C G C A T G A C T C G A T G C A T C T G A G C A T T C G A A T G C A C G T A C G T

TBP/MA0108.2/Jaspar

Match Rank:3
Score:0.50
Offset:-1
Orientation:reverse strand
Alignment:-RAGGSTTTYTASATKC
NNNNNNCTTTTATAN--
 A C G T C T G A C G T A A C T G A C T G A T G C A G C T A G C T A C G T G A T C A C G T C T G A A T C G C G T A C G A T A C G T A G T C
A T G C T A G C A T G C A T G C A T C G A T G C A G T C G C A T G A C T C G A T G C A T C T G A G C A T T C G A A T G C A C G T A C G T

FOXK2(Forkhead)/U2OS-FOXK2-ChIP-Seq(E-MTAB-2204)/Homer

Match Rank:4
Score:0.49
Offset:2
Orientation:forward strand
Alignment:RAGGSTTTYTASATKC
--SCHTGTTTACAT--
 C T G A C G T A A C T G A C T G A T G C A G C T A G C T A C G T G A T C A C G T C T G A A T C G C G T A C G A T A C G T A G T C
A C G T A C G T T A C G T A G C G C T A C G A T C T A G A C G T C A G T C A G T G C T A A G T C G T C A G C A T A C G T A C G T

FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer

Match Rank:5
Score:0.49
Offset:5
Orientation:reverse strand
Alignment:RAGGSTTTYTASATKC
-----TGTTTACTTT-
 C T G A C G T A A C T G A C T G A T G C A G C T A G C T A C G T G A T C A C G T C T G A A T C G C G T A C G A T A C G T A G T C
A C G T A C G T A C G T A C G T A C G T A C G T C T A G A C G T A C G T A C G T C T G A A G T C G C A T A G C T C G A T A C G T

SD0003.1_at_AC_acceptor/Jaspar

Match Rank:6
Score:0.49
Offset:0
Orientation:reverse strand
Alignment:RAGGSTTTYTASATKC
AAGGATATNTN-----
 C T G A C G T A A C T G A C T G A T G C A G C T A G C T A C G T G A T C A C G T C T G A A T C G C G T A C G A T A C G T A G T C
T C G A C G T A C T A G T A C G C G T A A G C T C G T A A C G T A G T C C G A T C G A T A C G T A C G T A C G T A C G T A C G T

FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:7
Score:0.49
Offset:5
Orientation:reverse strand
Alignment:RAGGSTTTYTASATKC
-----TGTTTACTTT-
 C T G A C G T A A C T G A C T G A T G C A G C T A G C T A C G T G A T C A C G T C T G A A T C G C G T A C G A T A C G T A G T C
A C G T A C G T A C G T A C G T A C G T A C G T C T A G A C G T A C G T A C G T C T G A A G T C G C A T A G C T C G A T A C G T

FoxL2(Forkhead)/Ovary-FoxL2-ChIP-Seq(GSE60858)/Homer

Match Rank:8
Score:0.49
Offset:3
Orientation:reverse strand
Alignment:RAGGSTTTYTASATKC
---CBTGTTTAYAWW-
 C T G A C G T A A C T G A C T G A T G C A G C T A G C T A C G T G A T C A C G T C T G A A T C G C G T A C G A T A C G T A G T C
A C G T A C G T A C G T A T G C A C G T A C G T C T A G A C G T A C G T A C G T C G T A A G T C G C T A C G A T G C A T A C G T

FOXB1/MA0845.1/Jaspar

Match Rank:9
Score:0.48
Offset:4
Orientation:reverse strand
Alignment:RAGGSTTTYTASATKC
----ATATTTACATA-
 C T G A C G T A A C T G A C T G A T G C A G C T A G C T A C G T G A T C A C G T C T G A A T C G C G T A C G A T A C G T A G T C
A C G T A C G T A C G T A C G T C G T A G A C T T C G A C G A T C G A T A C G T C T G A G A T C G C T A G A C T C G T A A C G T

Foxk1/MA0852.1/Jaspar

Match Rank:10
Score:0.47
Offset:0
Orientation:reverse strand
Alignment:RAGGSTTTYTASATKC-
NNNTTTGTTTACATTTN
 C T G A C G T A A C T G A C T G A T G C A G C T A G C T A C G T G A T C A C G T C T G A A T C G C G T A C G A T A C G T A G T C A C G T
T A G C A G C T A T C G G C A T C G A T A C G T C T A G A C G T C G A T A C G T C G T A A G T C G T C A G C A T G C A T G A C T G C A T