Information for 13-CTGAGAGAGGTAC (Motif 19)

A G T C A C G T A C T G C G T A A C T G G T C A A T C G C G T A C T A G A C T G A C G T C G T A A G T C
Reverse Opposite:
A C T G A C G T C G T A A G T C A G T C A C G T A T G C C A G T A G T C G C A T A G T C C G T A A C T G
p-value:1e-8
log p-value:-2.035e+01
Information Content per bp:1.916
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.74%
Number of Background Sequences with motif3.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets37.0 +/- 34.0bp
Average Position of motif in Background42.9 +/- 15.8bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0140.1_Irf6_2/Jaspar

Match Rank:1
Score:0.56
Offset:-4
Orientation:reverse strand
Alignment:----CTGAGAGAGGTAC
NNNACCGAGAGTNNN--
 A C G T A C G T A C G T A C G T A G T C A C G T A C T G C G T A A C T G G T C A A T C G C G T A C T A G A C T G A C G T C G T A A G T C
A T C G G A C T C A T G G T C A A G T C G A T C C T A G T C G A T A C G G T C A C A T G C G A T T C A G T A C G A C G T A C G T A C G T

PB0152.1_Nkx3-1_2/Jaspar

Match Rank:2
Score:0.55
Offset:2
Orientation:forward strand
Alignment:CTGAGAGAGGTAC------
--ACTCCAAGTACTTGGAA
 A G T C A C G T A C T G C G T A A C T G G T C A A T C G C G T A C T A G A C T G A C G T C G T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T T C G A G T A C C G A T A T G C T A G C C T G A C T G A C A T G A G C T T C G A G T A C G A C T G A C T A C T G T C A G T G C A G T C A

PB0137.1_Irf3_2/Jaspar

Match Rank:3
Score:0.55
Offset:1
Orientation:forward strand
Alignment:CTGAGAGAGGTAC--
-GGAGAAAGGTGCGA
 A G T C A C G T A C T G C G T A A C T G G T C A A T C G C G T A C T A G A C T G A C G T C G T A A G T C A C G T A C G T
A C G T C T A G C A T G C G T A C T A G C G T A G C T A C G T A A T C G T A C G C G A T A T C G A G T C C T A G C T G A

PB0156.1_Plagl1_2/Jaspar

Match Rank:4
Score:0.53
Offset:1
Orientation:forward strand
Alignment:CTGAGAGAGGTAC-----
-GCTGGGGGGTACCCCTT
 A G T C A C G T A C T G C G T A A C T G G T C A A T C G C G T A C T A G A C T G A C G T C G T A A G T C A C G T A C G T A C G T A C G T A C G T
A C G T C T A G A G T C G C A T C T A G C A T G A C T G C T A G A C T G A C T G A C G T C T G A G A T C G T A C G T A C G A T C G A C T C G A T

PB0138.1_Irf4_2/Jaspar

Match Rank:5
Score:0.51
Offset:-4
Orientation:reverse strand
Alignment:----CTGAGAGAGGTAC
GNNACCGAGAATNNN--
 A C G T A C G T A C G T A C G T A G T C A C G T A C T G C G T A A C T G G T C A A T C G C G T A C T A G A C T G A C G T C G T A A G T C
A T C G G T A C C T G A G C T A A G T C A G T C C A T G T C G A C A T G G C T A C T G A C G A T T C G A A T G C A G C T A C G T A C G T

Ronin(THAP)/ES-Thap11-ChIP-Seq(GSE51522)/Homer

Match Rank:6
Score:0.50
Offset:-5
Orientation:reverse strand
Alignment:-----CTGAGAGAGGTAC--
GCMTBCTGGGAGTTGTAGTY
 A C G T A C G T A C G T A C G T A C G T A G T C A C G T A C T G C G T A A C T G G T C A A T C G C G T A C T A G A C T G A C G T C G T A A G T C A C G T A C G T
C A T G T A G C G T A C A G C T A C G T T G A C A G C T C T A G A C T G C T A G C G T A T C A G G C A T A G C T A C T G C G A T C T G A A C T G A C G T A G T C

Bach2(bZIP)/OCILy7-Bach2-ChIP-Seq(GSE44420)/Homer

Match Rank:7
Score:0.50
Offset:-2
Orientation:forward strand
Alignment:--CTGAGAGAGGTAC
TGCTGAGTCA-----
 A C G T A C G T A G T C A C G T A C T G C G T A A C T G G T C A A T C G C G T A C T A G A C T G A C G T C G T A A G T C
C G A T T A C G T G A C G A C T C A T G C G T A T A C G A C G T G T A C C T G A A C G T A C G T A C G T A C G T A C G T

GFY-Staf(?,Zf)/Promoter/Homer

Match Rank:8
Score:0.49
Offset:-5
Orientation:reverse strand
Alignment:-----CTGAGAGAGGTAC--
GCATTCTGGGAATTGTAGTT
 A C G T A C G T A C G T A C G T A C G T A G T C A C G T A C T G C G T A A C T G G T C A A T C G C G T A C T A G A C T G A C G T C G T A A G T C A C G T A C G T
T C A G T A G C G T C A A G C T A C G T A G T C A G C T A C T G A C T G C T A G C G T A C T G A C G A T A G C T A C T G A C G T C T G A A C T G A C G T A G C T

PB0114.1_Egr1_2/Jaspar

Match Rank:9
Score:0.49
Offset:0
Orientation:forward strand
Alignment:CTGAGAGAGGTAC---
TGCGGAGTGGGACTGG
 A G T C A C G T A C T G C G T A A C T G G T C A A T C G C G T A C T A G A C T G A C G T C G T A A G T C A C G T A C G T A C G T
A C G T A C T G G A T C A C T G C T A G T C G A C T A G C A G T C T A G C A T G C A T G C G T A G A T C G C A T C T A G A C T G

POL009.1_DCE_S_II/Jaspar

Match Rank:10
Score:0.49
Offset:-1
Orientation:forward strand
Alignment:-CTGAGAGAGGTAC
GCTGTG--------
 A C G T A G T C A C G T A C T G C G T A A C T G G T C A A T C G C G T A C T A G A C T G A C G T C G T A A G T C
T A C G T A G C C A G T A T C G G A C T A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T