Information for 12-CAACATGGHTTACAGC (Motif 17)

A G T C G T C A C G T A A T G C C G T A C G A T C T A G A C T G G A T C A C G T A C G T C G T A A G T C C G T A A T C G A T G C
Reverse Opposite:
A T C G A T G C A C G T A C T G G C A T C G T A C G T A C T A G G T A C A G T C C G T A C G A T A T C G A C G T A C G T A C T G
p-value:1e-9
log p-value:-2.237e+01
Information Content per bp:1.800
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.74%
Number of Background Sequences with motif2.2
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets55.4 +/- 22.3bp
Average Position of motif in Background54.4 +/- 13.3bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Rhox11/MA0629.1/Jaspar

Match Rank:1
Score:0.60
Offset:4
Orientation:reverse strand
Alignment:CAACATGGHTTACAGC-----
----TCNNTTTACAGCGNNNT
 A G T C G T C A C G T A A T G C C G T A C G A T C T A G A C T G G A T C A C G T A C G T C G T A A G T C C G T A A T C G A T G C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C G A T A G T C A T C G G A T C C G A T C G A T C G A T C G T A G A T C G C T A A T C G A G T C C T A G A C G T G T A C A C G T G C A T

PH0157.1_Rhox11_1/Jaspar

Match Rank:2
Score:0.60
Offset:4
Orientation:reverse strand
Alignment:CAACATGGHTTACAGC-----
----TCNNTTTACAGCGNNNT
 A G T C G T C A C G T A A T G C C G T A C G A T C T A G A C T G G A T C A C G T A C G T C G T A A G T C C G T A A T C G A T G C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C G A T A G T C A T C G G A T C C G A T C G A T C G A T C G T A G A T C G C T A A T C G A G T C C T A G A C G T G T A C A C G T G C A T

PH0158.1_Rhox11_2/Jaspar

Match Rank:3
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:CAACATGGHTTACAGC-----
----TCNCTTTACAGCGNNNT
 A G T C G T C A C G T A A T G C C G T A C G A T C T A G A C T G G A T C A C G T A C G T C G T A A G T C C G T A A T C G A T G C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C G A T A G T C A T G C G A T C C G A T C G A T C G A T C G T A G A T C G C T A A T C G G A T C C T A G C A G T G T A C A G T C C G A T

PROX1/MA0794.1/Jaspar

Match Rank:4
Score:0.52
Offset:0
Orientation:forward strand
Alignment:CAACATGGHTTACAGC
CAAGACGCCTTA----
 A G T C G T C A C G T A A T G C C G T A C G A T C T A G A C T G G A T C A C G T A C G T C G T A A G T C C G T A A T C G A T G C
A G T C C T G A G C T A C T A G T C G A G A T C C A T G G A T C A G T C C A G T A G C T T C G A A C G T A C G T A C G T A C G T

YY1/MA0095.2/Jaspar

Match Rank:5
Score:0.52
Offset:0
Orientation:forward strand
Alignment:CAACATGGHTTACAGC
CAAGATGGCGGC----
 A G T C G T C A C G T A A T G C C G T A C G A T C T A G A C T G G A T C A C G T A C G T C G T A A G T C C G T A A T C G A T G C
T G A C C T G A T C G A T C A G C G T A A G C T C T A G C T A G G T A C A C T G T C A G G T A C A C G T A C G T A C G T A C G T

Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer

Match Rank:6
Score:0.51
Offset:4
Orientation:reverse strand
Alignment:CAACATGGHTTACAGC
----NGGGATTA----
 A G T C G T C A C G T A A T G C C G T A C G A T C T A G A C T G G A T C A C G T A C G T C G T A A G T C C G T A A T C G A T G C
A C G T A C G T A C G T A C G T T G A C C T A G C T A G T C A G G T C A G C A T G A C T G C T A A C G T A C G T A C G T A C G T

Twist(bHLH)/HMLE-TWIST1-ChIP-Seq(Chang_et_al)/Homer

Match Rank:7
Score:0.51
Offset:0
Orientation:forward strand
Alignment:CAACATGGHTTACAGC----
VCAKCTGGNNNCCAGMTGBN
 A G T C G T C A C G T A A T G C C G T A C G A T C T A G A C T G G A T C A C G T A C G T C G T A A G T C C G T A A T C G A T G C A C G T A C G T A C G T A C G T
T G A C G T A C C G T A A C T G T G A C C G A T A C T G A T C G A G C T T A C G T C G A T A G C G T A C C G T A A T C G T G A C G C A T A C T G A C T G A T G C

MEIS2/MA0774.1/Jaspar

Match Rank:8
Score:0.50
Offset:8
Orientation:forward strand
Alignment:CAACATGGHTTACAGC
--------TTGACAGC
 A G T C G T C A C G T A A T G C C G T A C G A T C T A G A C T G G A T C A C G T A C G T C G T A A G T C C G T A A T C G A T G C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G A T C A G T A C T G C G T A G T A C T G C A T A C G T A G C

Spz1/MA0111.1/Jaspar

Match Rank:9
Score:0.50
Offset:5
Orientation:forward strand
Alignment:CAACATGGHTTACAGC
-----AGGGTAACAGC
 A G T C G T C A C G T A A T G C C G T A C G A T C T A G A C T G G A T C A C G T A C G T C G T A A G T C C G T A A T C G A T G C
A C G T A C G T A C G T A C G T A C G T C T G A A T C G C T A G A C T G C A G T C G T A C G T A T A G C C T G A A C T G T A G C

PH0044.1_Homez/Jaspar

Match Rank:10
Score:0.49
Offset:-1
Orientation:forward strand
Alignment:-CAACATGGHTTACAGC
AAAACATCGTTTTTAAG
 A C G T A G T C G T C A C G T A A T G C C G T A C G A T C T A G A C T G G A T C A C G T A C G T C G T A A G T C C G T A A T C G A T G C
C G T A G C A T G C T A G C T A T G A C G C T A A C G T G T A C A C T G C G A T C G A T G C A T G A C T A G C T G C T A C T G A C T A G