Information for 9-TCTCTKTAHTTTGDTT (Motif 12)

A C G T T A G C A C G T A G T C A C G T C A T G C G A T C T G A G C A T C G A T C G A T A C G T A C T G C A T G C G A T C G A T
Reverse Opposite:
C G T A G C T A G A T C G T A C C G T A C G T A C G T A C G T A A G C T C G T A G T A C C G T A A C T G G T C A A C T G G T C A
p-value:1e-11
log p-value:-2.550e+01
Information Content per bp:1.729
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif1.03%
Number of Background Sequences with motif6.2
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets47.3 +/- 26.9bp
Average Position of motif in Background45.1 +/- 15.0bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0176.1_Sox5_2/Jaspar

Match Rank:1
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:TCTCTKTAHTTTGDTT
-NNCTNAATTATGANN
 A C G T T A G C A C G T A G T C A C G T C A T G C G A T C T G A G C A T C G A T C G A T A C G T A C T G C A T G C G A T C G A T
A C G T G A C T G A T C A T G C A C G T G C A T C T G A C G T A C G A T A C G T G T C A G A C T T C A G G C T A C G A T G C T A

NF1:FOXA1(CTF,Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:2
Score:0.54
Offset:0
Orientation:forward strand
Alignment:TCTCTKTAHTTTGDTT
NNTGTTTATTTTGGCA
 A C G T T A G C A C G T A G T C A C G T C A T G C G A T C T G A G C A T C G A T C G A T A C G T A C T G C A T G C G A T C G A T
C G A T G A C T C G A T T C A G G A C T A C G T C A G T C T G A G A C T G A C T A G C T C G A T A C T G A T C G G T A C G C T A

FOXP1/MA0481.1/Jaspar

Match Rank:3
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-TCTCTKTAHTTTGDTT
CTTTGTTTACTTTTN--
 A C G T A C G T T A G C A C G T A G T C A C G T C A T G C G A T C T G A G C A T C G A T C G A T A C G T A C T G C A T G C G A T C G A T
A G T C G C A T A C G T A C G T A C T G A C G T A C G T A C G T C G T A A G T C G A C T A G C T G C A T C G A T C A T G A C G T A C G T

Pit1+1bp(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:4
Score:0.52
Offset:4
Orientation:reverse strand
Alignment:TCTCTKTAHTTTGDTT
----TGAATTATGCAT
 A C G T T A G C A C G T A G T C A C G T C A T G C G A T C T G A G C A T C G A T C G A T A C G T A C T G C A T G C G A T C G A T
A C G T A C G T A C G T A C G T C G A T C T A G G T C A G C T A C G A T G C A T G C T A C G A T C A T G G A T C G C T A C G A T

PB0121.1_Foxj3_2/Jaspar

Match Rank:5
Score:0.51
Offset:1
Orientation:reverse strand
Alignment:TCTCTKTAHTTTGDTT--
-NNCTTTGTTTTGNTNNN
 A C G T T A G C A C G T A G T C A C G T C A T G C G A T C T G A G C A T C G A T C G A T A C G T A C T G C A T G C G A T C G A T A C G T A C G T
A C G T G C A T A T G C G T A C C G A T G C A T C G A T C T A G C G A T C A G T C G A T A C G T C T A G C A T G G A C T T A C G G C A T A C G T

Foxa2/MA0047.2/Jaspar

Match Rank:6
Score:0.51
Offset:2
Orientation:forward strand
Alignment:TCTCTKTAHTTTGDTT
--TGTTTACTTAGG--
 A C G T T A G C A C G T A G T C A C G T C A T G C G A T C T G A G C A T C G A T C G A T A C G T A C T G C A T G C G A T C G A T
A C G T A C G T A C G T C T A G A C G T A C G T A C G T T C G A A G T C G C A T A G C T C G T A C A T G A T C G A C G T A C G T

FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer

Match Rank:7
Score:0.50
Offset:2
Orientation:reverse strand
Alignment:TCTCTKTAHTTTGDTT
--TGTTTACTTT----
 A C G T T A G C A C G T A G T C A C G T C A T G C G A T C T G A G C A T C G A T C G A T A C G T A C T G C A T G C G A T C G A T
A C G T A C G T A C G T C T A G A C G T A C G T A C G T C T G A A G T C G C A T A G C T C G A T A C G T A C G T A C G T A C G T

FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:8
Score:0.50
Offset:2
Orientation:reverse strand
Alignment:TCTCTKTAHTTTGDTT
--TGTTTACTTT----
 A C G T T A G C A C G T A G T C A C G T C A T G C G A T C T G A G C A T C G A T C G A T A C G T A C T G C A T G C G A T C G A T
A C G T A C G T A C G T C T A G A C G T A C G T A C G T C T G A A G T C G C A T A G C T C G A T A C G T A C G T A C G T A C G T

PROP1/MA0715.1/Jaspar

Match Rank:9
Score:0.50
Offset:6
Orientation:reverse strand
Alignment:TCTCTKTAHTTTGDTT-
------TAATTAAATTA
 A C G T T A G C A C G T A G T C A C G T C A T G C G A T C T G A G C A T C G A T C G A T A C G T A C T G C A T G C G A T C G A T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G C A T C T G A C G T A G A C T C A G T G C T A C T G A C G T A A G C T C G A T C G T A

PB0069.1_Sox21_1/Jaspar

Match Rank:10
Score:0.50
Offset:3
Orientation:reverse strand
Alignment:TCTCTKTAHTTTGDTT---
---NNTAATTATAATNANN
 A C G T T A G C A C G T A G T C A C G T C A T G C G A T C T G A G C A T C G A T C G A T A C G T A C T G C A T G C G A T C G A T A C G T A C G T A C G T
A C G T A C G T A C G T G T A C G C A T G C A T G C T A C G T A C G A T C G A T C T G A G A C T C G T A C G T A C G A T C G A T C G T A C G T A C G T A