Information for 5-WATGCATCCATTYACY (Motif 7)

C G A T G C T A A C G T A C T G A G T C G T C A A C G T A G T C A G T C C G T A A C G T A C G T A G C T C G T A G A T C A G C T
Reverse Opposite:
C T A G C A T G A C G T C T A G C G T A C G T A A C G T A C T G C T A G G T C A A C G T A C T G A G T C C G T A C A G T C G A T
p-value:1e-11
log p-value:-2.601e+01
Information Content per bp:1.808
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.76%
Number of Background Sequences with motif1.5
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets37.8 +/- 22.0bp
Average Position of motif in Background48.8 +/- 17.2bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0028.1_Hbp1_1/Jaspar

Match Rank:1
Score:0.71
Offset:2
Orientation:reverse strand
Alignment:WATGCATCCATTYACY--
--NNCATTCATTCATNNN
 C G A T G C T A A C G T A C T G A G T C G T C A A C G T A G T C A G T C C G T A A C G T A C G T A G C T C G T A G A T C A G C T A C G T A C G T
A C G T A C G T T C G A G A C T G T A C C G T A A G C T G A C T T G A C C G T A C G A T G C A T A T G C C G T A C G A T G C T A A C T G C G A T

PB0171.1_Sox18_2/Jaspar

Match Rank:2
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:WATGCATCCATTYACY--
--NNNNTGAATTCANNNC
 C G A T G C T A A C G T A C T G A G T C G T C A A C G T A G T C A G T C C G T A A C G T A C G T A G C T C G T A G A T C A G C T A C G T A C G T
A C G T A C G T A C T G C A T G G A T C G C T A A G C T C T A G G T C A C T G A G A C T C A G T G A T C T C G A T A C G A G C T T G A C G A T C

BARHL2/MA0635.1/Jaspar

Match Rank:3
Score:0.56
Offset:6
Orientation:reverse strand
Alignment:WATGCATCCATTYACY
------ANCGTTTANN
 C G A T G C T A A C G T A C T G A G T C G T C A A C G T A G T C A G T C C G T A A C G T A C G T A G C T C G T A G A T C A G C T
A C G T A C G T A C G T A C G T A C G T A C G T C T G A A G T C G A T C C T A G G C A T A C G T C G A T C G T A C T A G A T G C

PH0148.1_Pou3f3/Jaspar

Match Rank:4
Score:0.56
Offset:-5
Orientation:reverse strand
Alignment:-----WATGCATCCATTYACY
TNNATTATGCATANNTT----
 A C G T A C G T A C G T A C G T A C G T C G A T G C T A A C G T A C T G A G T C G T C A A C G T A G T C A G T C C G T A A C G T A C G T A G C T C G T A G A T C A G C T
G C A T G C A T G A C T G T C A C G A T C G A T C G T A A G C T C A T G G T A C C T G A C G A T C T G A G C A T G A C T C G A T C G A T A C G T A C G T A C G T A C G T

Nanog(Homeobox)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:5
Score:0.56
Offset:5
Orientation:forward strand
Alignment:WATGCATCCATTYACY
-----GGCCATTAAC-
 C G A T G C T A A C G T A C T G A G T C G T C A A C G T A G T C A G T C C G T A A C G T A C G T A G C T C G T A G A T C A G C T
A C G T A C G T A C G T A C G T A C G T C T A G T A C G G A T C G T A C G C T A A G C T A G C T G T C A T C G A T A G C A C G T

POL004.1_CCAAT-box/Jaspar

Match Rank:6
Score:0.56
Offset:2
Orientation:forward strand
Alignment:WATGCATCCATTYACY
--ACTAGCCAATCA--
 C G A T G C T A A C G T A C T G A G T C G T C A A C G T A G T C A G T C C G T A A C G T A C G T A G C T C G T A G A T C A G C T
A C G T A C G T G T C A A G T C G A C T C T G A C T A G A G T C A G T C C G T A C G T A C G A T T A G C T C G A A C G T A C G T

PB0068.1_Sox1_1/Jaspar

Match Rank:7
Score:0.55
Offset:4
Orientation:forward strand
Alignment:WATGCATCCATTYACY----
----AATCAATTCAATAATT
 C G A T G C T A A C G T A C T G A G T C G T C A A C G T A G T C A G T C C G T A A C G T A C G T A G C T C G T A G A T C A G C T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G C A T C G T A C A G T G A T C G C T A G C T A G C A T C G A T T A G C G C T A G C T A G C A T C G T A G T C A C G A T A C G T

PB0178.1_Sox8_2/Jaspar

Match Rank:8
Score:0.54
Offset:7
Orientation:forward strand
Alignment:WATGCATCCATTYACY-----
-------ACATTCATGACACG
 C G A T G C T A A C G T A C T G A G T C G T C A A C G T A G T C A G T C C G T A A C G T A C G T A G C T C G T A G A T C A G C T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A G A T C G C T A A C G T C G A T G A T C T C G A A C G T C T A G G C T A G T A C G T C A A T G C T A C G

YY1/MA0095.2/Jaspar

Match Rank:9
Score:0.53
Offset:3
Orientation:reverse strand
Alignment:WATGCATCCATTYACY
---GCNGCCATCTTG-
 C G A T G C T A A C G T A C T G A G T C G T C A A C G T A G T C A G T C C G T A A C G T A C G T A G C T C G T A G A T C A G C T
A C G T A C G T A C G T C A T G A G T C T G A C C A T G A G T C A G T C C T G A A C G T A G T C A G C T G A C T A C T G A C G T

PB0170.1_Sox17_2/Jaspar

Match Rank:10
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-WATGCATCCATTYACY
GACCACATTCATACAAT
 A C G T C G A T G C T A A C G T A C T G A G T C G T C A A C G T A G T C A G T C C G T A A C G T A C G T A G C T C G T A G A T C A G C T
T A C G G C T A A G T C G T A C G T C A A G T C G C T A A G C T C G A T T G A C C T G A A G C T T C G A G A T C T C G A C G T A C G A T