Information for 3-TGAAAGCKTTGATTCA (Motif 3)

C G A T T C A G C G T A C G T A C G T A A C T G A G T C A C G T A C G T A C G T A T C G C G T A A C G T A C G T G T A C G T C A
Reverse Opposite:
C A G T A C T G G T C A G T C A A C G T A T G C C G T A C G T A T G C A A C T G A G T C A C G T A C G T C G A T A G T C C G T A
p-value:1e-13
log p-value:-3.205e+01
Information Content per bp:1.749
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.91%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets71.5 +/- 17.2bp
Average Position of motif in Background68.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PBX1/MA0070.1/Jaspar

Match Rank:1
Score:0.58
Offset:7
Orientation:reverse strand
Alignment:TGAAAGCKTTGATTCA---
-------TTTGATTGATGN
 C G A T T C A G C G T A C G T A C G T A A C T G A G T C A C G T A C G T A C G T A T C G C G T A A C G T A C G T G T A C G T C A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G A T G C A T C A G T A C T G G T C A C G A T A C G T A C T G C G T A A C G T A C T G C A T G

Dux/MA0611.1/Jaspar

Match Rank:2
Score:0.58
Offset:8
Orientation:reverse strand
Alignment:TGAAAGCKTTGATTCA
--------TTGATTGN
 C G A T T C A G C G T A C G T A C G T A A C T G A G T C A C G T A C G T A C G T A T C G C G T A A C G T A C G T G T A C G T C A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T A C G T A C T G C G T A A C G T A C G T C T A G A T C G

Arid3a/MA0151.1/Jaspar

Match Rank:3
Score:0.57
Offset:7
Orientation:reverse strand
Alignment:TGAAAGCKTTGATTCA
-------TTTAAT---
 C G A T T C A G C G T A C G T A C G T A A C T G A G T C A C G T A C G T A C G T A T C G C G T A A C G T A C G T G T A C G T C A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C A T A C G T A C G T C T G A C G T A A C G T A C G T A C G T A C G T

Nr2e3/MA0164.1/Jaspar

Match Rank:4
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:TGAAAGCKTTGATTCA
---AAGCTTG------
 C G A T T C A G C G T A C G T A C G T A A C T G A G T C A C G T A C G T A C G T A T C G C G T A A C G T A C G T G T A C G T C A
A C G T A C G T A C G T C G T A C G T A A C T G A T G C A C G T A C G T C T A G A C G T A C G T A C G T A C G T A C G T A C G T

Cux2(Homeobox)/Liver-Cux2-ChIP-Seq(GSE35985)/Homer

Match Rank:5
Score:0.56
Offset:7
Orientation:reverse strand
Alignment:TGAAAGCKTTGATTCA-
-------ATTGATTYND
 C G A T T C A G C G T A C G T A C G T A A C T G A G T C A C G T A C G T A C G T A T C G C G T A A C G T A C G T G T A C G T C A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T A G C T A T C G G T C A A G C T G A C T A G C T T G A C C G A T

FOS::JUN/MA0099.2/Jaspar

Match Rank:6
Score:0.56
Offset:9
Orientation:reverse strand
Alignment:TGAAAGCKTTGATTCA
---------TGAGTCA
 C G A T T C A G C G T A C G T A C G T A A C T G A G T C A C G T A C G T A C G T A T C G C G T A A C G T A C G T G T A C G T C A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T A T C G G C T A A C T G A C G T G T A C C T G A

PB0082.1_Tcf3_1/Jaspar

Match Rank:7
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:TGAAAGCKTTGATTCA--
-NNTTCCTTTGATCTANA
 C G A T T C A G C G T A C G T A C G T A A C T G A G T C A C G T A C G T A C G T A T C G C G T A A C G T A C G T G T A C G T C A A C G T A C G T
A C G T C G A T C G A T C G A T A G C T A G T C A G T C G C A T G A C T C G A T A T C G C G T A C G A T T A G C G C A T C G T A C G A T C T G A

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:8
Score:0.55
Offset:5
Orientation:reverse strand
Alignment:TGAAAGCKTTGATTCA
-----CCTTTGATGT-
 C G A T T C A G C G T A C G T A C G T A A C T G A G T C A C G T A C G T A C G T A T C G C G T A A C G T A C G T G T A C G T C A
A C G T A C G T A C G T A C G T A C G T A T G C A G T C A C G T A C G T A C G T A T C G C G T A C G A T T A C G G A C T A C G T

PH0026.1_Duxbl/Jaspar

Match Rank:9
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:TGAAAGCKTTGATTCA----
---NNNNGTTGATTGGGTCG
 C G A T T C A G C G T A C G T A C G T A A C T G A G T C A C G T A C G T A C G T A T C G C G T A A C G T A C G T G T A C G T C A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A T G C C G T A A G T C A G T C T C A G G A C T C G A T C T A G C T G A A C G T A C G T C T A G T C A G T C A G G A C T G A T C T C A G

PB0084.1_Tcf7l2_1/Jaspar

Match Rank:10
Score:0.54
Offset:1
Orientation:forward strand
Alignment:TGAAAGCKTTGATTCA--
-ATTTCCTTTGATCTATA
 C G A T T C A G C G T A C G T A C G T A A C T G A G T C A C G T A C G T A C G T A T C G C G T A A C G T A C G T G T A C G T C A A C G T A C G T
A C G T C G T A C G A T C A G T A G C T A G T C A G T C G A C T G A C T C G A T A C T G C G T A C G A T T A G C G C A T C G T A C A G T T G C A