Information for 12-AGAAAGAAACAAACAA (Motif 25)

C G T A A C T G C G T A C G T A C G T A A C T G C G T A C G T A C G T A A G T C C G T A C G T A C G T A A G T C C G T A C G T A
Reverse Opposite:
A C G T A C G T A C T G A C G T A C G T A C G T A C T G A C G T A C G T A C G T A G T C A C G T A C G T A C G T A G T C A C G T
p-value:1e-1
log p-value:-4.246e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif0.15%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets84.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Foxd3/MA0041.1/Jaspar

Match Rank:1
Score:0.68
Offset:6
Orientation:reverse strand
Alignment:AGAAAGAAACAAACAA--
------AAACAAACATTC
 C G T A A C T G C G T A C G T A C G T A A C T G C G T A C G T A C G T A A G T C C G T A C G T A C G T A A G T C C G T A C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C T G A T G C A C T G A G A T C G T C A C G T A C G T A G A T C C T G A C G A T C G A T G A T C

MF0005.1_Forkhead_class/Jaspar

Match Rank:2
Score:0.61
Offset:6
Orientation:reverse strand
Alignment:AGAAAGAAACAAACAA
------AAATAAACA-
 C G T A A C T G C G T A C G T A C G T A A C T G C G T A C G T A C G T A A G T C C G T A C G T A C G T A A G T C C G T A C G T A
A C G T A C G T A C G T A C G T A C G T A C G T T C G A G T C A T C G A G A C T G T C A C T G A T C G A G A T C C G T A A C G T

FOXP1/MA0481.1/Jaspar

Match Rank:3
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-AGAAAGAAACAAACAA
CAAAAGTAAACAAAG--
 A C G T C G T A A C T G C G T A C G T A C G T A A C T G C G T A C G T A C G T A A G T C C G T A C G T A C G T A A G T C C G T A C G T A
G T A C G C T A C G T A T C G A C T G A T C A G G C A T C G T A C G T A C G T A T G A C C G T A T G C A C G T A T C A G A C G T A C G T

Foxj3/MA0851.1/Jaspar

Match Rank:4
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-AGAAAGAAACAAACAA
AAAAAGTAAACAAACAC
 A C G T C G T A A C T G C G T A C G T A C G T A A C T G C G T A C G T A C G T A A G T C C G T A C G T A C G T A A G T C C G T A C G T A
G C T A C T G A G T C A C G T A C T G A T C A G G A C T G T C A G C T A C G T A A G T C C G T A G C T A G C T A T A G C T G A C G T A C

PB0017.1_Foxj3_1/Jaspar

Match Rank:5
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-AGAAAGAAACAAACAA
AAAAAGTAAACAAACAC
 A C G T C G T A A C T G C G T A C G T A C G T A A C T G C G T A C G T A C G T A A G T C C G T A C G T A C G T A A G T C C G T A C G T A
G C T A C T G A G T C A C G T A C T G A T C A G G A C T G T C A G C T A C G T A A G T C C G T A G C T A G C T A T A G C T G A C G T A C

PB0071.1_Sox4_1/Jaspar

Match Rank:6
Score:0.57
Offset:2
Orientation:forward strand
Alignment:AGAAAGAAACAAACAA---
--AGAAGAACAAAGGACTA
 C G T A A C T G C G T A C G T A C G T A A C T G C G T A C G T A C G T A A G T C C G T A C G T A C G T A A G T C C G T A C G T A A C G T A C G T A C G T
A C G T A C G T G T C A A C T G C T G A C G T A C T A G T C G A C G T A A G T C C G T A C G T A C G T A C T A G T C A G T C G A A G T C G C A T G C T A

PB0093.1_Zfp105_1/Jaspar

Match Rank:7
Score:0.57
Offset:4
Orientation:forward strand
Alignment:AGAAAGAAACAAACAA---
----AACAAACAACAAGAG
 C G T A A C T G C G T A C G T A C G T A A C T G C G T A C G T A C G T A A G T C C G T A C G T A C G T A A G T C C G T A C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G C T A C G T A G A T C G T C A C G T A G C T A G A T C C T G A C G T A G T A C C T G A G C T A C A T G C G T A C T A G

PB0166.1_Sox12_2/Jaspar

Match Rank:8
Score:0.57
Offset:2
Orientation:forward strand
Alignment:AGAAAGAAACAAACAA--
--AAACAGACAAAGGAAT
 C G T A A C T G C G T A C G T A C G T A A C T G C G T A C G T A C G T A A G T C C G T A C G T A C G T A A G T C C G T A C G T A A C G T A C G T
A C G T A C G T T G C A T G C A C G T A A G C T C T G A A T C G C G T A A G T C G C T A T C G A G C T A T A C G T C A G T G C A C G T A G A C T

Foxq1/MA0040.1/Jaspar

Match Rank:9
Score:0.57
Offset:7
Orientation:reverse strand
Alignment:AGAAAGAAACAAACAA--
-------AATAAACAATN
 C G T A A C T G C G T A C G T A C G T A A C T G C G T A C G T A C G T A A G T C C G T A C G T A C G T A A G T C C G T A C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C T A T G C A A G C T C G T A C G T A C G T A A G T C C G T A C G T A A G C T C G T A

PB0016.1_Foxj1_1/Jaspar

Match Rank:10
Score:0.57
Offset:1
Orientation:forward strand
Alignment:AGAAAGAAACAAACAA-
-AAAGTAAACAAAAATT
 C G T A A C T G C G T A C G T A C G T A A C T G C G T A C G T A C G T A A G T C C G T A C G T A C G T A A G T C C G T A C G T A A C G T
A C G T G C T A C G A T G C T A C T A G G A C T G T C A G C T A C G T A G A T C C G T A G T C A C G T A G T C A C G T A C A G T C A G T