Information for 11-TTTAAATCCAGGGGCT (Motif 23)

A C G T A C G T A C G T C G T A C G T A C G T A A C G T A G T C A G T C C G T A A C T G A C T G A C T G A C T G A G T C A C G T
Reverse Opposite:
C G T A A C T G A G T C A G T C A G T C A G T C A C G T A C T G A C T G C G T A A C G T A C G T A C G T C G T A C G T A C G T A
p-value:1e-6
log p-value:-1.452e+01
Information Content per bp:1.530
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.45%
Number of Background Sequences with motif1.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets34.7 +/- 24.9bp
Average Position of motif in Background34.3 +/- 15.5bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

LIN54/MA0619.1/Jaspar

Match Rank:1
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-TTTAAATCCAGGGGCT
ATTTGAATT--------
 A C G T A C G T A C G T A C G T C G T A C G T A C G T A A C G T A G T C A G T C C G T A A C T G A C T G A C T G A C T G A G T C A C G T
C G T A A C G T A C G T A G C T C T A G C G T A C G T A G A C T G A C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:2
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:TTTAAATCCAGGGGCT
TTTGAAACCG------
 A C G T A C G T A C G T C G T A C G T A C G T A A C G T A G T C A G T C C G T A A C T G A C T G A C T G A C T G A G T C A C G T
A C G T A C G T A C G T T A C G C G T A C T G A C G T A G T A C A G T C A T C G A C G T A C G T A C G T A C G T A C G T A C G T

LRF(Zf)/Erythroblasts-ZBTB7A-ChIP-Seq(GSE74977)/Homer

Match Rank:3
Score:0.51
Offset:7
Orientation:reverse strand
Alignment:TTTAAATCCAGGGGCT-
-------NRRGGGTCTT
 A C G T A C G T A C G T C G T A C G T A C G T A A C G T A G T C A G T C C G T A A C T G A C T G A C T G A C T G A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G T C G A C T A G A C T G A C T G A C T G A C G T A G T C A C G T A G C T

PH0171.1_Nkx2-1/Jaspar

Match Rank:4
Score:0.51
Offset:2
Orientation:reverse strand
Alignment:TTTAAATCCAGGGGCT--
--AANTTCAAGTGGCTTN
 A C G T A C G T A C G T C G T A C G T A C G T A A C G T A G T C A G T C C G T A A C T G A C T G A C T G A C T G A G T C A C G T A C G T A C G T
A C G T A C G T C G T A C G T A C A G T A C G T G C A T A G T C C T G A C G T A A C T G C G A T C T A G A T C G T A G C G A C T A C G T T C G A

TCF4/MA0830.1/Jaspar

Match Rank:5
Score:0.49
Offset:6
Orientation:reverse strand
Alignment:TTTAAATCCAGGGGCT
------NNCAGGTGCG
 A C G T A C G T A C G T C G T A C G T A C G T A A C G T A G T C A G T C C G T A A C T G A C T G A C T G A C T G A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G C T A T A C G G A T C C G T A A T C G T A C G A C G T C T A G A G T C C T A G

Mouse_Recombination_Hotspot(Zf)/Testis-DMC1-ChIP-Seq(GSE24438)/Homer

Match Rank:6
Score:0.49
Offset:-2
Orientation:forward strand
Alignment:--TTTAAATCCAGGGGCT--
ACTYKNATTCGTGNTACTTC
 A C G T A C G T A C G T A C G T A C G T C G T A C G T A C G T A A C G T A G T C A G T C C G T A A C T G A C T G A C T G A C T G A G T C A C G T A C G T A C G T
C T G A G T A C G A C T A G T C C A G T T G C A C T G A A C G T A G C T G A T C C T A G C G A T A C T G A T G C G A C T C T G A G A T C G A C T A G C T G A T C

TCF3/MA0522.2/Jaspar

Match Rank:7
Score:0.49
Offset:6
Orientation:reverse strand
Alignment:TTTAAATCCAGGGGCT
------NNCAGGTGTN
 A C G T A C G T A C G T C G T A C G T A C G T A A C G T A G T C A G T C C G T A A C T G A C T G A C T G A C T G A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G T C A T C A G A G T C C G T A A T C G T A C G C G A T A C T G A G C T C A G T

POL012.1_TATA-Box/Jaspar

Match Rank:8
Score:0.48
Offset:-1
Orientation:forward strand
Alignment:-TTTAAATCCAGGGGCT
GTATAAAAGGCGGGG--
 A C G T A C G T A C G T A C G T C G T A C G T A C G T A A C G T A G T C A G T C C G T A A C T G A C T G A C T G A C T G A G T C A C G T
T A C G A G C T C G T A G A C T C G T A C G T A C T G A C G T A T C A G T A C G T A G C T A C G T A C G A T C G T A C G A C G T A C G T

TBP/MA0108.2/Jaspar

Match Rank:9
Score:0.48
Offset:-1
Orientation:forward strand
Alignment:-TTTAAATCCAGGGGCT
GTATAAAAGGCGGGG--
 A C G T A C G T A C G T A C G T C G T A C G T A C G T A A C G T A G T C A G T C C G T A A C T G A C T G A C T G A C T G A G T C A C G T
T A C G A G C T C G T A G A C T C G T A C G T A C T G A C G T A T C A G T A C G T A G C T A C G T A C G A T C G T A C G A C G T A C G T

Pitx1/MA0682.1/Jaspar

Match Rank:10
Score:0.48
Offset:2
Orientation:forward strand
Alignment:TTTAAATCCAGGGGCT
--TTAATCCC------
 A C G T A C G T A C G T C G T A C G T A C G T A A C G T A G T C A G T C C G T A A C T G A C T G A C T G A C T G A G T C A C G T
A C G T A C G T G A C T G C A T T C G A C G T A C A G T G A T C G A T C G T A C A C G T A C G T A C G T A C G T A C G T A C G T