Information for 11-RMAYGCMCTCCAG (Motif 2)

C T G A G T C A C G T A A G C T A C T G A G T C G T C A A G T C A C G T A G T C A G T C C G T A A C T G
Reverse Opposite:
A G T C A C G T A C T G A C T G C G T A A C T G A C G T A C T G G T A C C T G A A C G T A C G T A G C T
p-value:1e-13
log p-value:-3.205e+01
Information Content per bp:1.879
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.91%
Number of Background Sequences with motif1.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets37.5 +/- 18.2bp
Average Position of motif in Background9.4 +/- 2.9bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:1
Score:0.67
Offset:3
Orientation:reverse strand
Alignment:RMAYGCMCTCCAG
---NSCACTYVAV
 C T G A G T C A C G T A A G C T A C T G A G T C G T C A A G T C A C G T A G T C A G T C C G T A A C T G
A C G T A C G T A C G T C T A G T A G C A G T C G C T A G A T C A C G T G A T C T C G A C T G A T A C G

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:2
Score:0.67
Offset:2
Orientation:forward strand
Alignment:RMAYGCMCTCCAG
--AGCCACTCAAG
 C T G A G T C A C G T A A G C T A C T G A G T C G T C A A G T C A C G T A G T C A G T C C G T A A C T G
A C G T A C G T C T G A C T A G T A G C A G T C G C T A A G T C A C G T A G T C G T C A C T G A T A C G

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:3
Score:0.64
Offset:3
Orientation:forward strand
Alignment:RMAYGCMCTCCAG
---RSCACTYRAG
 C T G A G T C A C G T A A G C T A C T G A G T C G T C A A G T C A C G T A G T C A G T C C G T A A C T G
A C G T A C G T A C G T C T A G T A C G A G T C C G T A A G T C A C G T A G T C T C G A C G T A T A C G

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:4
Score:0.64
Offset:2
Orientation:forward strand
Alignment:RMAYGCMCTCCAG
--AASCACTCAA-
 C T G A G T C A C G T A A G C T A C T G A G T C G T C A A G T C A C G T A G T C A G T C C G T A A C T G
A C G T A C G T C T G A C T G A T A G C G A T C G C T A G T A C A C G T G A T C T G C A C G T A A C G T

PB0091.1_Zbtb3_1/Jaspar

Match Rank:5
Score:0.61
Offset:0
Orientation:forward strand
Alignment:RMAYGCMCTCCAG----
AATCGCACTGCATTCCG
 C T G A G T C A C G T A A G C T A C T G A G T C G T C A A G T C A C G T A G T C A G T C C G T A A C T G A C G T A C G T A C G T A C G T
C T G A C T G A A C G T A T G C A T C G G T A C C T G A A T G C C G A T A C T G A T G C G T C A A G C T A C G T A T G C A T G C A C T G

TEAD2(TEA)/Py2T-Tead2-ChIP-Seq(GSE55709)/Homer

Match Rank:6
Score:0.60
Offset:4
Orientation:reverse strand
Alignment:RMAYGCMCTCCAG-
----RCATTCCWGG
 C T G A G T C A C G T A A G C T A C T G A G T C G T C A A G T C A C G T A G T C A G T C C G T A A C T G A C G T
A C G T A C G T A C G T A C G T C T G A T G A C C T G A A C G T C G A T A G T C A G T C G C T A C T A G T A C G

NKX2-8/MA0673.1/Jaspar

Match Rank:7
Score:0.58
Offset:4
Orientation:forward strand
Alignment:RMAYGCMCTCCAG
----CCACTTGAA
 C T G A G T C A C G T A A G C T A C T G A G T C G T C A A G T C A C G T A G T C A G T C C G T A A C T G
A C G T A C G T A C G T A C G T T A G C G A T C G T C A G A T C A G C T G A C T T A C G G C T A T C G A

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:8
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:RMAYGCMCTCCAG
--MRSCACTYAA-
 C T G A G T C A C G T A A G C T A C T G A G T C G T C A A G T C A C G T A G T C A G T C C G T A A C T G
A C G T A C G T G T C A C T G A T A G C A G T C C G T A G T A C G C A T A G T C C T G A T C G A A C G T

TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer

Match Rank:9
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:RMAYGCMCTCCAG-
----GCATTCCAGN
 C T G A G T C A C G T A A G C T A C T G A G T C G T C A A G T C A C G T A G T C A G T C C G T A A C T G A C G T
A C G T A C G T A C G T A C G T C T A G T G A C C G T A A C G T A C G T A G T C A G T C C G T A C A T G C T A G

Bcl6/MA0463.1/Jaspar

Match Rank:10
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:RMAYGCMCTCCAG----
---NGCTTTCTAGGAAN
 C T G A G T C A C G T A A G C T A C T G A G T C G T C A A G T C A C G T A G T C A G T C C G T A A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C G A T C A T G G T A C G A C T A G C T G A C T A G T C A G C T C G T A C T A G C A T G T C G A G C T A G T C A