Information for 10-SGTTTTCYTGCTGAAA (Motif 19)

A T G C C T A G A C G T A C G T A G C T A C G T G T A C G A C T C A G T T A C G A G T C C G A T T C A G G T C A G T C A C T G A
Reverse Opposite:
A G C T A C G T A C G T A G T C C G T A T C A G A T G C G C T A C T G A A C T G T C G A C T G A G T C A C G T A A G T C T A C G
p-value:1e-7
log p-value:-1.724e+01
Information Content per bp:1.713
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.52%
Number of Background Sequences with motif61.4
Percentage of Background Sequences with motif0.13%
Average Position of motif in Targets60.8 +/- 26.9bp
Average Position of motif in Background49.8 +/- 35.7bp
Strand Bias (log2 ratio + to - strand density)-1.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:1
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:SGTTTTCYTGCTGAAA
-CTGTTCCTGG-----
 A T G C C T A G A C G T A C G T A G C T A C G T G T A C G A C T C A G T T A C G A G T C C G A T T C A G G T C A G T C A C T G A
A C G T T A G C C G A T A T C G A C G T A C G T A G T C A G T C G C A T C A T G A T C G A C G T A C G T A C G T A C G T A C G T

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:2
Score:0.56
Offset:6
Orientation:forward strand
Alignment:SGTTTTCYTGCTGAAA
------CCTGCTGAGH
 A T G C C T A G A C G T A C G T A G C T A C G T G T A C G A C T C A G T T A C G A G T C C G A T T C A G G T C A G T C A C T G A
A C G T A C G T A C G T A C G T A C G T A C G T A G T C G T A C A G C T C T A G A G T C C G A T A C T G C G T A A C T G G T C A

E2F7/MA0758.1/Jaspar

Match Rank:3
Score:0.56
Offset:2
Orientation:forward strand
Alignment:SGTTTTCYTGCTGAAA
--TTTTCCCGCCAAAA
 A T G C C T A G A C G T A C G T A G C T A C G T G T A C G A C T C A G T T A C G A G T C C G A T T C A G G T C A G T C A C T G A
A C G T A C G T C G A T C G A T A G C T A G C T A T G C A T G C A G T C T C A G A G T C A T G C C G T A C G T A G C T A C G T A

PB0206.1_Zic2_2/Jaspar

Match Rank:4
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:SGTTTTCYTGCTGAAA--
---TCNCCTGCTGNGNNN
 A T G C C T A G A C G T A C G T A G C T A C G T G T A C G A C T C A G T T A C G A G T C C G A T T C A G G T C A G T C A C T G A A C G T A C G T
A C G T A C G T A C G T G C A T A G T C A C G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G A C T C A T G C T A G

PB0205.1_Zic1_2/Jaspar

Match Rank:5
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:SGTTTTCYTGCTGAAA--
---TNTCCTGCTGTGNNG
 A T G C C T A G A C G T A C G T A G C T A C G T G T A C G A C T C A G T T A C G A G T C C G A T T C A G G T C A G T C A C T G A A C G T A C G T
A C G T A C G T A C G T G C A T A G T C C A G T T G A C G T A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G C A T C A T G T C A G

Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer

Match Rank:6
Score:0.54
Offset:6
Orientation:forward strand
Alignment:SGTTTTCYTGCTGAAA--
------GGTGYTGACAGS
 A T G C C T A G A C G T A C G T A G C T A C G T G T A C G A C T C A G T T A C G A G T C C G A T T C A G G T C A G T C A C T G A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T C A G A T C G G A C T A C T G G A C T C A G T C T A G C G T A G T A C C G T A C T A G A T C G

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:7
Score:0.53
Offset:3
Orientation:reverse strand
Alignment:SGTTTTCYTGCTGAAA
---CCCCCTGCTGTG-
 A T G C C T A G A C G T A C G T A G C T A C G T G T A C G A C T C A G T T A C G A G T C C G A T T C A G G T C A G T C A C T G A
A C G T A C G T A C G T G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G A C G T

PB0207.1_Zic3_2/Jaspar

Match Rank:8
Score:0.52
Offset:3
Orientation:reverse strand
Alignment:SGTTTTCYTGCTGAAA--
---NNTCCTGCTGTGNNN
 A T G C C T A G A C G T A C G T A G C T A C G T G T A C G A C T C A G T T A C G A G T C C G A T T C A G G T C A G T C A C T G A A C G T A C G T
A C G T A C G T A C G T G C A T A T C G C A G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G G A C T A C T G G A T C G C A T G T A C

bZIP:IRF(bZIP,IRF)/Th17-BatF-ChIP-Seq(GSE39756)/Homer

Match Rank:9
Score:0.51
Offset:0
Orientation:forward strand
Alignment:SGTTTTCYTGCTGAAA--
NAGTTTCABTHTGACTNW
 A T G C C T A G A C G T A C G T A G C T A C G T G T A C G A C T C A G T T A C G A G T C C G A T T C A G G T C A G T C A C T G A A C G T A C G T
A G T C C T G A A T C G A G C T A G C T G A C T A G T C G C T A A C G T C G A T G C A T C G A T A T C G C G T A T A G C G C A T A T G C C G T A

NRL/MA0842.1/Jaspar

Match Rank:10
Score:0.51
Offset:4
Orientation:forward strand
Alignment:SGTTTTCYTGCTGAAA
----AATTTGCTGAC-
 A T G C C T A G A C G T A C G T A G C T A C G T G T A C G A C T C A G T T A C G A G T C C G A T T C A G G T C A G T C A C T G A
A C G T A C G T A C G T A C G T C G T A C G T A G C A T G C A T G A C T T C A G G T A C G C A T C A T G G C T A A G T C A C G T