Information for 19-CCCTTTGCCAGGT (Motif 17)

A G T C A G T C G T A C A C G T A C G T A C G T A C T G A G T C A G T C C G T A A C T G A C T G A C G T
Reverse Opposite:
C G T A G T A C A G T C A C G T A C T G C T A G A G T C C G T A C G T A C G T A A C T G A C T G A C T G
p-value:1e-7
log p-value:-1.739e+01
Information Content per bp:1.947
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.61%
Number of Background Sequences with motif3.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets34.8 +/- 29.9bp
Average Position of motif in Background46.6 +/- 16.7bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0104.1_Meis2/Jaspar

Match Rank:1
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:CCCTTTGCCAGGT----
-NTATTGACAGGTNNTN
 A G T C A G T C G T A C A C G T A C G T A C G T A C T G A G T C A G T C C G T A A C T G A C T G A C G T A C G T A C G T A C G T A C G T
A C G T C T A G C A G T G C T A C G A T G A C T C T A G C G T A A G T C C T G A A C T G A T C G G A C T T A G C A G C T G C A T C G A T

PH0140.1_Pknox1/Jaspar

Match Rank:2
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:CCCTTTGCCAGGT----
-GGATTGACAGGTCNTT
 A G T C A G T C G T A C A C G T A C G T A C G T A C T G A G T C A G T C C G T A A C T G A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C T G A C T G C G T A C G A T A C G T C T A G C G T A A G T C C T G A A C T G A T C G G A C T T A G C A C G T G A C T G C A T

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:3
Score:0.64
Offset:4
Orientation:forward strand
Alignment:CCCTTTGCCAGGT
----TTGCCAAG-
 A G T C A G T C G T A C A C G T A C G T A C G T A C T G A G T C A G T C C G T A A C T G A C T G A C G T
A C G T A C G T A C G T A C G T A G C T A C G T A C T G A T G C A G T C C G T A C T G A T A C G A C G T

PH0102.1_Meis1/Jaspar

Match Rank:4
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:CCCTTTGCCAGGT----
-NTATTGACAGCTNNTT
 A G T C A G T C G T A C A C G T A C G T A C G T A C T G A G T C A G T C C G T A A C T G A C T G A C G T A C G T A C G T A C G T A C G T
A C G T C T A G A C G T C G T A C G A T A C G T A C T G C G T A A G T C C T G A A C T G A T G C G A C T T A G C A T C G G C A T G C A T

PH0105.1_Meis3/Jaspar

Match Rank:5
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:CCCTTTGCCAGGT----
-GTATTGACAGGTNNTT
 A G T C A G T C G T A C A C G T A C G T A C G T A C T G A G T C A G T C C G T A A C T G A C T G A C G T A C G T A C G T A C G T A C G T
A C G T C A T G A C G T C G T A C G A T G A C T A C T G C G T A A G T C C T G A C T A G T A C G G A C T T G C A G C T A G A C T G C A T

PH0170.1_Tgif2/Jaspar

Match Rank:6
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:CCCTTTGCCAGGT----
-GTATTGACAGCTNNTT
 A G T C A G T C G T A C A C G T A C G T A C G T A C T G A G T C A G T C C G T A A C T G A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C T G A C G T C G T A C G A T C G A T A C T G C G T A A G T C C T G A C A T G T A G C G A C T T C G A T A C G G C A T C G A T

MEIS2/MA0774.1/Jaspar

Match Rank:7
Score:0.60
Offset:4
Orientation:forward strand
Alignment:CCCTTTGCCAGGT
----TTGACAGC-
 A G T C A G T C G T A C A C G T A C G T A C G T A C T G A G T C A G T C C G T A A C T G A C T G A C G T
A C G T A C G T A C G T A C G T C G A T C A G T A C T G C G T A G T A C T G C A T A C G T A G C A C G T

ZEB1(Zf)/PDAC-ZEB1-ChIP-Seq(GSE64557)/Homer

Match Rank:8
Score:0.60
Offset:7
Orientation:forward strand
Alignment:CCCTTTGCCAGGT----
-------VCAGGTRDRY
 A G T C A G T C G T A C A C G T A C G T A C G T A C T G A G T C A G T C C G T A A C T G A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G C A G T A C C G T A A T C G A C T G A C G T C T A G C G A T T C G A A G T C

PH0141.1_Pknox2/Jaspar

Match Rank:9
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:CCCTTTGCCAGGT----
-NNATTGACAGGTGCTT
 A G T C A G T C G T A C A C G T A C G T A C G T A C T G A G T C A G T C C G T A A C T G A C T G A C G T A C G T A C G T A C G T A C G T
A C G T T C G A C A G T C G T A C A G T A G C T C T A G C G T A A G T C C T G A C A T G A T C G A G C T T A C G A G T C G A C T C G A T

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:10
Score:0.59
Offset:2
Orientation:forward strand
Alignment:CCCTTTGCCAGGT
--HTTTCCCASG-
 A G T C A G T C G T A C A C G T A C G T A C G T A C T G A G T C A G T C C G T A A C T G A C T G A C G T
A C G T A C G T G A C T C A G T A G C T C G A T A G T C G A T C A G T C C G T A A T G C T C A G A C G T