Information for 10-CCGCCGTGAACCG (Motif 9)

A G T C A G T C A T C G A G T C A G T C A C T G A C G T A C T G G T C A C G T A A G T C A G T C A C T G
Reverse Opposite:
A G T C A C T G A C T G A C G T A C G T A G T C T C G A A G T C A C T G A C T G A T G C C T A G A C T G
p-value:1e-9
log p-value:-2.133e+01
Information Content per bp:1.929
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.57%
Number of Background Sequences with motif2.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets63.6 +/- 23.1bp
Average Position of motif in Background45.6 +/- 18.0bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MYBL1/MA0776.1/Jaspar

Match Rank:1
Score:0.65
Offset:2
Orientation:forward strand
Alignment:CCGCCGTGAACCG-
--ACCGTTAACGGT
 A G T C A G T C A T C G A G T C A G T C A C T G A C G T A C T G G T C A C G T A A G T C A G T C A C T G A C G T
A C G T A C G T C T G A T G A C T A G C T C A G G A C T G C A T C G T A T C G A G T A C A T C G C A T G G A C T

PB0153.1_Nr2f2_2/Jaspar

Match Rank:2
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:CCGCCGTGAACCG-----
--NNNNTGACCCGGCGCG
 A G T C A G T C A T C G A G T C A G T C A C T G A C G T A C T G G T C A C G T A A G T C A G T C A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C G A T T C G A T A G C A T C G A G C T T C A G G T C A G T A C G T A C A G T C T A C G T C A G G T A C A C T G G T A C A C T G

MF0009.1_TRP(MYB)_class/Jaspar

Match Rank:3
Score:0.55
Offset:8
Orientation:reverse strand
Alignment:CCGCCGTGAACCG---
--------AACCGANA
 A G T C A G T C A T C G A G T C A G T C A C T G A C G T A C T G G T C A C G T A A G T C A G T C A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A T A G C A G T C C T A G G C T A G T A C G C T A

E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer

Match Rank:4
Score:0.54
Offset:0
Orientation:forward strand
Alignment:CCGCCGTGAACCG
CWGGCGGGAA---
 A G T C A G T C A T C G A G T C A G T C A C T G A C G T A C T G G T C A C G T A A G T C A G T C A C T G
T A G C C G A T T A C G A C T G A G T C A C T G A T C G A T C G C G T A C T G A A C G T A C G T A C G T

PB0157.1_Rara_2/Jaspar

Match Rank:5
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:CCGCCGTGAACCG-----
--NNCNTGACCCCGCTCT
 A G T C A G T C A T C G A G T C A G T C A C T G A C G T A C T G G T C A C G T A A G T C A G T C A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T G C A T G A C C A G T G A C T T C A G C G T A G T A C G T A C A T G C T A G C T C A G G T A C C A G T G T A C C A G T

RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:6
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:CCGCCGTGAACCG
TGACCTTGACCT-
 A G T C A G T C A T C G A G T C A G T C A C T G A C G T A C T G G T C A C G T A A G T C A G T C A C T G
G A C T T A C G G C T A T G A C A G T C A G C T A C G T C T A G T C G A G T A C G T A C A G C T A C G T

YY2/MA0748.1/Jaspar

Match Rank:7
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--CCGCCGTGAACCG
GTCCGCCATTA----
 A C G T A C G T A G T C A G T C A T C G A G T C A G T C A C T G A C G T A C T G G T C A C G T A A G T C A G T C A C T G
C T A G C G A T G A T C A T G C T A C G T G A C A G T C C G T A C G A T G A C T C G T A A C G T A C G T A C G T A C G T

PB0057.1_Rxra_1/Jaspar

Match Rank:8
Score:0.52
Offset:1
Orientation:forward strand
Alignment:CCGCCGTGAACCG-----
-TGTCGTGACCCCTTAAT
 A G T C A G T C A T C G A G T C A G T C A C T G A C G T A C T G G T C A C G T A A G T C A G T C A C T G A C G T A C G T A C G T A C G T A C G T
A C G T C A G T A T C G G A C T A G T C C A T G A G C T T C A G G T C A G T A C G T A C A G T C A G T C C G A T G A C T T C G A G T C A A G C T

PB0109.1_Bbx_2/Jaspar

Match Rank:9
Score:0.51
Offset:-1
Orientation:reverse strand
Alignment:-CCGCCGTGAACCG---
NNNNCTGTTAACNNTNN
 A C G T A G T C A G T C A T C G A G T C A G T C A C T G A C G T A C T G G T C A C G T A A G T C A G T C A C T G A C G T A C G T A C G T
A G T C G A T C T G C A C G T A T A G C A G C T C A T G C A G T A G C T C T G A G T C A G A T C T C G A C T G A C G A T A G T C C T G A

BMYB(HTH)/Hela-BMYB-ChIP-Seq(GSE27030)/Homer

Match Rank:10
Score:0.50
Offset:6
Orientation:forward strand
Alignment:CCGCCGTGAACCG---
------NHAACBGYYV
 A G T C A G T C A T C G A G T C A G T C A C T G A C G T A C T G G T C A C G T A A G T C A G T C A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A G T C G C A T C G T A C G T A G T A C A C G T A C T G G A T C G A T C T C G A